RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 LDLRAD2Q5SZI1 272 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 ZNF782Q6ZMW2 699 aaPredicted RBP12.96□□□□□ -0.33
MUC1-220ENST00000498431 THAP5Q7Z6K1 395 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 AQP11Q8NBQ7 271 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 OR2T33Q8NG76 320 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 OR4M1Q8NGD0 313 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 OR8B12Q8NGG6 310 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 ABCB9Q9NP78 766 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 TCF19Q9Y242 345 aa12.96□□□□□ -0.33
MUC1-220ENST00000498431 A0A1W2PRX2 142 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 A6NDX4 124 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 FAM90A8PA6NJQ4 464 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 RFPL4AA6NLU0 287 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 RFPL4AL1F8VTS6 287 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 KRT36O76013 467 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 CEBPDP49716 269 aaPredicted RBP12.95□□□□□ -0.34
MUC1-220ENST00000498431 BLVRAP53004 296 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 LGALS4P56470 323 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 ZNF273Q14593 569 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 CNN3Q15417 329 aaKnown RBP12.95□□□□□ -0.34
MUC1-220ENST00000498431 OR2T5Q6IEZ7 315 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 ZFP1Q6P2D0 407 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 OR2T29Q8NH02 315 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 AQP3Q92482 292 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.95□□□□□ -0.34
MUC1-220ENST00000498431 CMC2Q9NRP2 79 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 VNN3Q9NY84 501 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 BAIAP2Q9UQB8 552 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 KLHDC2Q9Y2U9 406 aa12.95□□□□□ -0.34
MUC1-220ENST00000498431 RIIAD1A6NNX1 92 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 SELENOFO60613 162 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 MTRF1O75570 445 aaKnown RBP12.94□□□□□ -0.34
MUC1-220ENST00000498431 CST1P01037 141 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 IFNGP01579 166 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 ZNF3P17036 446 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 JUNBP17275 347 aaPredicted RBP12.94□□□□□ -0.34
MUC1-220ENST00000498431 CD33P20138 364 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 GNG3P63215 75 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 SHFQ7M4L6 423 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 IQCF1Q8N6M8 205 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 DTX3Q8N9I9 347 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 WFDC9Q8NEX5 89 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 THEM6Q8WUY1 208 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 OTULINQ96BN8 352 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 HIST1H2AAQ96QV6 131 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 REEP1Q9H902 201 aa12.94□□□□□ -0.34
MUC1-220ENST00000498431 GNGT2O14610 69 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 GLCEO94923 617 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 CCNB2O95067 398 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 LYNP07948 512 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 FCGR1AP12314 374 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 DLX6P56179 175 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 PSMA6P60900 246 aaKnown RBP12.93□□□□□ -0.34
MUC1-220ENST00000498431 BLCAPP62952 87 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 GK3PQ14409 553 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 CEACAM21Q3KPI0 293 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 HAGHLQ6PII5 290 aaPredicted RBP12.93□□□□□ -0.34
MUC1-220ENST00000498431 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.93□□□□□ -0.34
MUC1-220ENST00000498431 OR2T27Q8NH04 317 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 OTOSQ8NHW6 89 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 PYDC1Q8WXC3 89 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 STMN2Q93045 179 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 PRSS22Q9GZN4 317 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 OR51V1Q9H2C8 321 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 USE1Q9NZ43 259 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 DNAJB9Q9UBS3 223 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 LRP12Q9Y561 859 aa12.93□□□□□ -0.34
MUC1-220ENST00000498431 WI2-2373I1.2A0A1W2PRP0 233 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 MEX3AA1L020 520 aaKnown RBP12.92□□□□□ -0.34
MUC1-220ENST00000498431 ODF3BA8MYP8 253 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 PIPP12273 146 aaPredicted RBP12.92□□□□□ -0.34
MUC1-220ENST00000498431 FASP25445 335 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 PRDX2P32119 198 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 SSX2Q16385 188 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 KRT74Q7RTS7 529 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 BATF2Q8N1L9 274 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 FAM81AQ8TBF8 368 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 RPS4Y2Q8TD47 263 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 S100A14Q9HCY8 104 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 SAMHD1Q9Y3Z3 626 aaKnown RBP12.92□□□□□ -0.34
MUC1-220ENST00000498431 U3KQV3 271 aa12.92□□□□□ -0.34
MUC1-220ENST00000498431 SLC1A7O00341 560 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 SYNGR1O43759 233 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 PEX14O75381 377 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 ARG1P05089 322 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 MAP2K3P46734 347 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 CD83Q01151 205 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 ATP6AP1Q15904 470 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 ARSJQ5FYB0 599 aaPredicted RBP12.91□□□□□ -0.34
MUC1-220ENST00000498431 MOB3CQ70IA8 216 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 ZNF561Q8N587 486 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 POC1AQ8NBT0 407 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 OCSTAMPQ9BR26 566 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 DGCR6LQ9BY27 220 aa12.91□□□□□ -0.34
MUC1-220ENST00000498431 ABCB10Q9NRK6 738 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms