RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 C20orf203Q8NBC4 194 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF738Q8NE65 137 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 OR2Y1Q8NGV0 311 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 OR52N1Q8NH53 320 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 OR6X1Q8NH79 312 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF420Q8TAQ5 688 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ACER1Q8TDN7 264 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ESR2Q92731 530 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 CPNE4Q96A23 557 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 MAGOHBQ96A72 148 aaKnown RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 TAMM41Q96BW9 452 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 DCPSQ96C86 337 aaKnown RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 SEC22AQ96IW7 307 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF75AQ96N20 296 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 MS4A4EQ96PG1 132 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 OR8B4Q96RC9 309 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 NRTNQ99748 197 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 RSG1Q9BU20 258 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF426Q9BUY5 554 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 CHIAQ9BZP6 476 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 NXF3Q9H4D5 531 aaKnown RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 CWH43Q9H720 699 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ACP6Q9NPH0 428 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 AGPAT4Q9NRZ5 378 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 B3GNT2Q9NY97 397 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 TAS2R1Q9NYW7 299 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 USE1Q9NZ43 259 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 STOML2Q9UJZ1 356 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 SNX12Q9UMY4 172 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 ACOT9Q9Y305 439 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 PRELID3BQ9Y3B1 194 aa3.45□□□□□ -1.86
SF3B1-212ENST00000496458 RPL36Q9Y3U8 105 aaKnown RBP3.45□□□□□ -1.86
SF3B1-212ENST00000496458 A0A0A6YYD5 115 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 PQLC2LA1A4F0 135 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 SMIM23A6NLE4 172 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 VSTM2BA6NLU5 285 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 F8W036 122 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 K7N7A8 449 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 SULT2B1O00204 365 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 PLPP1O14494 284 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 PPP1R2P9O14990 202 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 EEDO75530 441 aaKnown RBP3.44□□□□□ -1.86
SF3B1-212ENST00000496458 LYPLA2O95372 231 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 NSA2O95478 260 aaKnown RBP3.44□□□□□ -1.86
SF3B1-212ENST00000496458 CLIC3O95833 236 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 HBE1P02100 147 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 SERPINA5P05154 406 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 RHOCP08134 193 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 RAB3AP20336 220 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 RAB4AP20338 218 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 MAGP20916 626 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 HTR1EP28566 365 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 AQP1P29972 269 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 OR1E1P30953 314 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 ACTR1BP42025 376 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 RPL14P50914 215 aaKnown RBP3.44□□□□□ -1.86
SF3B1-212ENST00000496458 NKX2-5P52952 324 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-212ENST00000496458 FKBP1AP62942 108 aaKnown RBP3.44□□□□□ -1.86
SF3B1-212ENST00000496458 SLC35B1P78383 322 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 C2orf80Q0P641 193 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 CDK10Q15131 360 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 SGCAQ16586 387 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 DNAL1Q4LDG9 190 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 ACSBG2Q5FVE4 666 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 XKRXQ6PP77 449 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 SSX6Q7RTT6 188 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF547Q8IVP9 402 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 VN1R2Q8NFZ6 395 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 OR6K6Q8NGW6 343 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 OR51F2Q8NH61 342 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 SLC7A13Q8TCU3 470 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 FAM172AQ8WUF8 416 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 DNAJB3Q8WWF6 145 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 OR8D1Q8WZ84 308 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 RORBQ92753 470 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 ITCHQ96J02 903 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 TBX15Q96SF7 602 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 CYP2S1Q96SQ9 504 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 DOK1Q99704 481 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 C1orf50Q9BV19 199 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 KIFC1Q9BW19 673 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 CLN6Q9NWW5 311 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 C1orf109Q9NX04 203 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 CYB5R1Q9UHQ9 305 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 GLS2Q9UI32 602 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 PDE4DIPQ5VU43 2346 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 PHF3Q92576 2039 aaKnown RBP3.44□□□□□ -1.86
SF3B1-212ENST00000496458 CLUHO75153 1309 aa3.44□□□□□ -1.86
SF3B1-212ENST00000496458 MYH11P35749 1972 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 LOC100131303A0A0U1RQF7 123 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 A0A1W2PRG6 482 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ISPDA4D126 451 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 C2orf74A8MZ97 194 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 CDC7O00311 574 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 PLPP3O14495 311 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 UGT1A9O60656 530 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 MPDU1O75352 247 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 ADAP1O75689 374 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 RCBTB2O95199 551 aa3.43□□□□□ -1.86
SF3B1-212ENST00000496458 LSM8O95777 96 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms