RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OR14K1Q8NGZ2 314 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 OR2T27Q8NH04 317 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 SDSLQ96GA7 329 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 CIB1Q99828 191 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 SEMA6AQ9H2E6 1030 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 METTL8Q9H825 291 aaKnown RBP10.46□□□□□ -0.73
PTPRF-214ENST00000496043 GPR173Q9NS66 373 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 TRBV23-1A0A0A0MS06 115 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PRD5 423 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PRF3 423 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PRM7 423 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 PQLC2LA1A4F0 135 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 CLPSL1A2RUU4 121 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 BTBD17A6NE02 478 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 METTL15A6NJ78 407 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 RFPL4AA6NLU0 287 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 DHRS7CA6NNS2 312 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 RFPL4AL1F8VTS6 287 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 H0YAE9 185 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 J3QT63 122 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 GPR137BO60478 399 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 NOS1APO75052 506 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-214ENST00000496043 POLR2IP36954 125 aaKnown RBP10.45□□□□□ -0.74
PTPRF-214ENST00000496043 RELBQ01201 579 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 TMED1Q13445 227 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 SMIM21Q3B7S5 101 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 PLEKHG7Q6ZR37 379 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 Q6ZSR3 168 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 ASRGL1Q7L266 308 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 ZNF561Q8N587 486 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 OR5D13Q8NGL4 314 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 OR8J1Q8NGP2 316 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 TNFRSF14Q92956 283 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 TBX5Q99593 518 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 ADI1Q9BV57 179 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 OSBPL10Q9BXB5 764 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 RIBC2Q9H4K1 309 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 ZNF222Q9UK12 451 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTPRF-214ENST00000496043 SLC7A11Q9UPY5 501 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 SLC22A13Q9Y226 551 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 POLDIP2Q9Y2S7 368 aa10.45□□□□□ -0.74
PTPRF-214ENST00000496043 SF3B6Q9Y3B4 125 aaKnown RBP10.45□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PPH5 198 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PQL4 384 aaPredicted RBP10.44□□□□□ -0.74
PTPRF-214ENST00000496043 MEIOCA2RUB1 952 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 A6NIN4 97 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 SLC1A7O00341 560 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 SYNGR1O43759 233 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 SULT1C4O75897 302 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 NXPH2O95156 264 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 PAHP00439 452 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 PGA5P0DJD9 388 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 CDC42P60953 191 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 PRB3Q04118 309 aaPredicted RBP10.44□□□□□ -0.74
PTPRF-214ENST00000496043 ACSM1Q08AH1 577 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 FAM185AQ8N0U4 392 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 CD177Q8N6Q3 437 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 CCDC54Q8NEL0 328 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 TRUB1Q8WWH5 349 aaKnown RBP10.44□□□□□ -0.74
PTPRF-214ENST00000496043 RFKQ969G6 155 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 ZNF488Q96MN9 340 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 RBM4BQ9BQ04 359 aaKnown RBP10.44□□□□□ -0.74
PTPRF-214ENST00000496043 OAZ3Q9UMX2 235 aa10.44□□□□□ -0.74
PTPRF-214ENST00000496043 SAC3D1A6NKF1 404 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 SYT7O43581 403 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 SERPINA3P01011 423 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 CCL1P22362 96 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 DLX1P56177 255 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 KLRD1Q13241 179 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 ODF4Q2M2E3 257 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 TREML4Q6UXN2 200 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 SSX6Q7RTT6 188 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 CATSPERDQ86XM0 798 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 ANGPTL5Q86XS5 388 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 OR10H4Q8NGA5 316 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 EME1Q96AY2 570 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 GABARAPL3Q9BY60 117 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 PKIBQ9C010 78 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 HEXA-AS1Q9H8Q6 139 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 ELL3Q9HB65 397 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-214ENST00000496043 ZNRD1Q9P1U0 126 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
PTPRF-214ENST00000496043 hCG_1809904A0A1W2PP81 198 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PPE2 198 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 FAM230AA0A1W2PPH8 454 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PR64 198 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 A0A1W2PRV1 198 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 ANKRD61A6NGH8 418 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 APOL3O95236 402 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 MPZP25189 248 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 SAA4P35542 130 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 FUT6P51993 359 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 RPL31P62899 125 aaKnown RBP10.42□□□□□ -0.74
PTPRF-214ENST00000496043 IL24Q13007 206 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 TAF9Q16594 264 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 MIDNQ504T8 468 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 TMEM200BQ69YZ2 307 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 PNKDQ8N490 385 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 ZSCAN4Q8NAM6 433 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms