RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SLC1A7O00341 560 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 DHRS3O75911 302 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 NRASP01111 189 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 RIDAP52758 137 aaKnown RBP18.89■□□□□ 0.61
COL27A1-208ENST00000494780 RPL31P62899 125 aaKnown RBP18.89■□□□□ 0.61
COL27A1-208ENST00000494780 SNAPC1Q16533 368 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 ZNF684Q5T5D7 378 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 CRIP3Q6Q6R5 217 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 LIAT1Q6ZQX7 453 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 DTX3Q8N9I9 347 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 OR2T6Q8NHC8 308 aa18.89■□□□□ 0.61
COL27A1-208ENST00000494780 hCG_1809904A0A1W2PP81 198 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 A0A1W2PPE2 198 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 A0A1W2PR64 198 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 A0A1W2PRV1 198 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 CCDC182A6NF36 153 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 PRR32B1ATL7 298 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 NOS1APO75052 506 aaPredicted RBP18.88■□□□□ 0.61
COL27A1-208ENST00000494780 MRPL3P09001 348 aaKnown RBP18.88■□□□□ 0.61
COL27A1-208ENST00000494780 PGA5P0DJD9 388 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 PRDX2P32119 198 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 TMEM200BQ69YZ2 307 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 ZNF573Q86YE8 665 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 C11orf42Q8N5U0 333 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 THTPAQ9BU02 230 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 TVP23BQ9NYZ1 205 aa18.88■□□□□ 0.61
COL27A1-208ENST00000494780 J3QT63 122 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 HAAOP46952 286 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 CLVS2Q5SYC1 327 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 DNAJC9Q8WXX5 260 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 CFHR4Q92496 578 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 PPP1R14AQ96A00 147 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 ZNF488Q96MN9 340 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 NPFFR1Q9GZQ6 430 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 USE1Q9NZ43 259 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 DNAJB9Q9UBS3 223 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 IKZF2Q9UKS7 526 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 COPS3Q9UNS2 423 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 POLDIP2Q9Y2S7 368 aa18.87■□□□□ 0.61
COL27A1-208ENST00000494780 SYNGR1O43759 233 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 TTRP02766 147 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 OPN1MWP04001 364 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 OPN1MW2P0DN77 364 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 OPN1MW3P0DN78 364 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 CRISP1P54107 249 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 LGALS4P56470 323 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 MFGE8Q08431 387 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-208ENST00000494780 TMEM42Q69YG0 159 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 KLHDC1Q8N7A1 406 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 CCDC197Q8NCU1 140 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 MOB1AQ9H8S9 216 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 FOXJ3Q9UPW0 622 aa18.86■□□□□ 0.61
COL27A1-208ENST00000494780 DLGAP1O14490 977 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 ERVFRD-1P60508 538 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 CBX1P83916 185 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 CALHM1Q8IU99 346 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 OR4M1Q8NGD0 313 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 OR2T27Q8NH04 317 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 CNN2Q99439 309 aaKnown RBP18.85■□□□□ 0.61
COL27A1-208ENST00000494780 NRIP2Q9BQI9 281 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 TTTY10Q9BZA0 68 aa18.85■□□□□ 0.61
COL27A1-208ENST00000494780 PAPOLBQ9NRJ5 636 aaKnown RBP18.85■□□□□ 0.61
COL27A1-208ENST00000494780 PQLC2LA1A4F0 135 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 LOC110117498-PIK3R3F6TDL0 507 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 SRSF10O75494 262 aaKnown RBP18.84■□□□□ 0.61
COL27A1-208ENST00000494780 NXPH2O95156 264 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 FAM107AO95990 144 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 COX7A1P24310 79 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 PAX6P26367 422 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 CEBPDP49716 269 aaPredicted RBP18.84■□□□□ 0.61
COL27A1-208ENST00000494780 BMXP51813 675 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 ACTR3P61158 418 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 BEAN1Q3B7T3 259 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 C11orf44Q8N8P7 122 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 PIFOQ8TCI5 191 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 MNTQ99583 582 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 HES4Q9HCC6 221 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 GPR173Q9NS66 373 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 GTF2A1LQ9UNN4 478 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 V9GYS6 101 aa18.84■□□□□ 0.61
COL27A1-208ENST00000494780 G3V4G9 280 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 CHST1O43916 411 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 FKBP6O75344 327 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 TK1P04183 234 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 CCL3L1P16619 93 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 MPZP25189 248 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 ZNF273Q14593 569 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 ZNF322Q6U7Q0 402 aaPredicted RBP18.83■□□□□ 0.6
COL27A1-208ENST00000494780 ASRGL1Q7L266 308 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 SPATA24Q86W54 205 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 ELMOD2Q8IZ81 293 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 NRBF2Q96F24 287 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 PRRG3Q9BZD7 231 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL27A1-208ENST00000494780 R4GMQ9 66 aa18.83■□□□□ 0.6
COL27A1-208ENST00000494780 MEGF11A6BM72 1044 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 FAM90A8PA6NJQ4 464 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 DHRS7CA6NNS2 312 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 VGLL3A8MV65 326 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 PRKYO43930 277 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms