RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CHID1Q9BWS9 393 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 PBOV1Q9GZY1 135 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 MEGF9Q9H1U4 602 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 GPR173Q9NS66 373 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 OR14J1Q9UGF5 321 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 GTF2A1LQ9UNN4 478 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 PIGLQ9Y2B2 252 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 NBEAL2Q6ZNJ1 2754 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 OR5B21A6NL26 309 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 GNGT2O14610 69 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 PIN1P1O15428 100 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 GSC2O15499 205 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 PRODHO43272 600 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 MTRF1O75570 445 aaKnown RBP10.24□□□□□ -0.77
SKA1-205ENST00000494518 RAP2AP10114 183 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 CD28P10747 220 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 PRKACGP22612 351 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 SLC2A5P22732 501 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 PRDX2P32119 198 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 LGALS4P56470 323 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 RIPPLY1Q0D2K3 151 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 SMIM21Q3B7S5 101 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 OXLD1Q5BKU9 147 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 PLEKHG7Q6ZR37 379 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 PIGWQ7Z7B1 504 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 C11orf42Q8N5U0 333 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 POC1AQ8NBT0 407 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 OR5A2Q8NGI9 324 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 PIFOQ8TCI5 191 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 LRGUKQ96M69 825 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 NPFFR1Q9GZQ6 430 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 MUC13Q9H3R2 512 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 RANBP3Q9H6Z4 567 aaPredicted RBP10.24□□□□□ -0.77
SKA1-205ENST00000494518 ZNF702PQ9H963 129 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 RAB18Q9NP72 206 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 IKZF2Q9UKS7 526 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 COPS3Q9UNS2 423 aa10.24□□□□□ -0.77
SKA1-205ENST00000494518 A0A0U1RQV5 110 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 CCDC182A6NF36 153 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 H3BSH0 61 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 M0R129 80 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 SLC1A7O00341 560 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 MAGEB4O15481 346 aaPredicted RBP10.23□□□□□ -0.77
SKA1-205ENST00000494518 FBXO24O75426 580 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 E2F6O75461 281 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 NXPH2O95156 264 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 HMGN1P05114 100 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 OSMP13725 252 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 JUNBP17275 347 aaPredicted RBP10.23□□□□□ -0.77
SKA1-205ENST00000494518 HAAOP46952 286 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 ESRRGP62508 458 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 FBLN7Q53RD9 439 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 SLC35D3Q5M8T2 416 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 ZNF684Q5T5D7 378 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 ASRGL1Q7L266 308 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 ADGRG5Q8IZF4 528 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 OR5K1Q8NHB7 308 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 MRAPQ8TCY5 172 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 NSL1Q96IY1 281 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 MMP28Q9H239 520 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 C1orf21Q9H246 121 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 HEXA-AS1Q9H8Q6 139 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 TVP23BQ9NYZ1 205 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 ENPP5Q9UJA9 477 aa10.23□□□□□ -0.77
SKA1-205ENST00000494518 ARRDC5A6NEK1 342 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 J3QT63 122 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 INMTO95050 263 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 NRASP01111 189 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 ARG1P05089 322 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 PGA5P0DJD9 388 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 MNAT1P51948 309 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 CDK5Q00535 292 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 SNAPC1Q16533 368 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 KPRPQ5T749 579 aaPredicted RBP10.22□□□□□ -0.77
SKA1-205ENST00000494518 KCTD18Q6PI47 426 aaPredicted RBP10.22□□□□□ -0.77
SKA1-205ENST00000494518 C11orf88Q6PI97 169 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 CCBE1Q6UXH8 406 aaPredicted RBP10.22□□□□□ -0.77
SKA1-205ENST00000494518 BCDIN3DQ7Z5W3 292 aaKnown RBP10.22□□□□□ -0.77
SKA1-205ENST00000494518 ZNF561Q8N587 486 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 CANT1Q8WVQ1 401 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 R3HDM4Q96D70 268 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 MROQ9BYG7 248 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 YIPF3Q9GZM5 350 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 ZNF556Q9HAH1 456 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 SERTAD4Q9NUC0 356 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 RASL12Q9NYN1 266 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 USE1Q9NZ43 259 aa10.22□□□□□ -0.77
SKA1-205ENST00000494518 A0A1W2PPH5 198 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 ALX3O95076 343 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 IGLV3-1P01715 115 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 TTRP02766 147 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 TK1P04183 234 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 RIDAP52758 137 aaKnown RBP10.21□□□□□ -0.77
SKA1-205ENST00000494518 SSX2Q16385 188 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 AANATQ16613 207 aa10.21□□□□□ -0.77
SKA1-205ENST00000494518 ZNF829Q3KNS6 432 aaPredicted RBP10.21□□□□□ -0.77
SKA1-205ENST00000494518 ARSJQ5FYB0 599 aaPredicted RBP10.21□□□□□ -0.77
SKA1-205ENST00000494518 LDLRAD2Q5SZI1 272 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms