RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ZNF250P15622 560 aa17.6■□□□□ 0.41
KPNA1-210ENST00000494339 BCAP31P51572 246 aa17.6■□□□□ 0.41
KPNA1-210ENST00000494339 RPS23P62266 143 aaKnown RBP17.6■□□□□ 0.41
KPNA1-210ENST00000494339 FCAMRQ8WWV6 532 aa17.6■□□□□ 0.41
KPNA1-210ENST00000494339 PLPPR2Q96GM1 343 aa17.6■□□□□ 0.41
KPNA1-210ENST00000494339 ADAT1Q9BUB4 502 aaKnown RBP17.6■□□□□ 0.41
KPNA1-210ENST00000494339 BANF2Q9H503 90 aa17.6■□□□□ 0.41
KPNA1-210ENST00000494339 ESRP2Q9H6T0 727 aaKnown RBP17.6■□□□□ 0.41
KPNA1-210ENST00000494339 TMEM100Q9NV29 134 aa17.6■□□□□ 0.41
KPNA1-210ENST00000494339 ROS1P08922 2347 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 METTL21EPA6NDL7 271 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 TMEM14DPA8MWL7 114 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 H0YL77 283 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 HAAOP46952 286 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 PDZK1IP1Q13113 114 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 TOMM5Q8N4H5 51 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 ZNF808Q8N4W9 903 aaPredicted RBP17.59■□□□□ 0.41
KPNA1-210ENST00000494339 NUP37Q8NFH4 326 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 MSL2Q9HCI7 577 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 NPDC1Q9NQX5 325 aaPredicted RBP17.59■□□□□ 0.41
KPNA1-210ENST00000494339 CA10Q9NS85 328 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 POU2F3Q9UKI9 436 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 FLNCQ14315 2725 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 ANKHD1Q8IWZ3 2542 aaKnown RBP17.59■□□□□ 0.41
KPNA1-210ENST00000494339 CRTAPO75718 401 aaPredicted RBP17.59■□□□□ 0.41
KPNA1-210ENST00000494339 SCGNO76038 276 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 MPIG6BO95866 241 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 CD3GP09693 182 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 SERPINA2P20848 420 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 AGAP20933 346 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 ALDH3B1P43353 468 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 KLF3P57682 345 aaPredicted RBP17.59■□□□□ 0.41
KPNA1-210ENST00000494339 NCMAPQ5T1S8 102 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 RAB12Q6IQ22 244 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 OR2W3Q7Z3T1 314 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 ZNF611Q8N823 705 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 OR10AD1Q8NGE0 317 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 ENKURQ8TC29 256 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 GHRLQ9UBU3 117 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 ATP23Q9Y6H3 246 aa17.59■□□□□ 0.41
KPNA1-210ENST00000494339 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.58■□□□□ 0.4
KPNA1-210ENST00000494339 OR5B21A6NL26 309 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 SSX4O60224 188 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 GNG3P63215 75 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 OR8G1Q15617 311 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 FAM189A2Q15884 450 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 Q6ZR03 302 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 SLC25A26Q70HW3 274 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 KCNG3Q8TAE7 436 aa17.58■□□□□ 0.4
KPNA1-210ENST00000494339 C7orf50Q9BRJ6 194 aaKnown RBP17.58■□□□□ 0.4
KPNA1-210ENST00000494339 CENPXA8MT69 81 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 MLNRO43193 412 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 CDC14BO60729 498 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 ECDO95905 644 aaPredicted RBP17.57■□□□□ 0.4
KPNA1-210ENST00000494339 AP3S2P59780 193 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 RSU1Q15404 277 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 DNM1P46Q6ZS02 220 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 ACBD4Q8NC06 268 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 MICU1Q9BPX6 476 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 RTL8AQ9BWD3 113 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 TMEM59Q9BXS4 323 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 MRPL37Q9BZE1 423 aaKnown RBP17.57■□□□□ 0.4
KPNA1-210ENST00000494339 CST11Q9H112 138 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 RBMX2Q9Y388 322 aaKnown RBP17.57■□□□□ 0.4
KPNA1-210ENST00000494339 IGKV1-12A0A0C4DH73 117 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 IGHV3-64DA0A0J9YX35 117 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 PYCARD-AS1I3L0S3 204 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 IGKV1D-12P01611 117 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 IGHV3-13P01766 116 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 DYRK1AQ13627 763 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 BATF2Q8N1L9 274 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 DUSP18Q8NEJ0 188 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 OR51F2Q8NH61 342 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 OR52I2Q8NH67 350 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 NEDD4LQ96PU5 975 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 METTL9Q9H1A3 318 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 AUNIPQ9H7T9 357 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 CACNG2Q9Y698 323 aa17.57■□□□□ 0.4
KPNA1-210ENST00000494339 TRAV18A0A075B6X5 111 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 ORC5O43913 435 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 GSTT2BP0CG30 244 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 GDNFP39905 211 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 MOGAT2Q3SYC2 334 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 HAGHLQ6PII5 290 aaPredicted RBP17.56■□□□□ 0.4
KPNA1-210ENST00000494339 WDR86Q86TI4 376 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 GTF3AQ92664 365 aaKnown RBP17.56■□□□□ 0.4
KPNA1-210ENST00000494339 GCDHQ92947 438 aaPredicted RBP17.56■□□□□ 0.4
KPNA1-210ENST00000494339 PPP1R14BQ96C90 147 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 NICN1Q9BSH3 213 aa17.56■□□□□ 0.4
KPNA1-210ENST00000494339 IGLV3-9A0A075B6K5 115 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 FAM240BA0A1B0GVZ2 78 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 HTR3BO95264 441 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 PTHLHP12272 177 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 MGMTP16455 207 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 KIR2DL3P43628 341 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 GPR176Q14439 515 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 RNASE12Q5GAN4 147 aaKnown RBP17.55■□□□□ 0.4
KPNA1-210ENST00000494339 DMRTC2Q8IXT2 367 aaPredicted RBP17.55■□□□□ 0.4
KPNA1-210ENST00000494339 OR13G1Q8NGZ3 307 aa17.55■□□□□ 0.4
KPNA1-210ENST00000494339 MRPL24Q96A35 216 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms