RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SLC18A1P54219 525 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 SNRPEP62304 92 aaKnown RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 ARF6P62330 175 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 PRB3Q04118 309 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 GAGE2BQ13066 116 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 FHL1Q13642 323 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 ZNF404Q494X3 552 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 GAGE2EQ4V326 116 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 CCDC92Q53HC0 331 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 GPR157Q5UAW9 335 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 WDR25Q64LD2 544 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 NANOGP8Q6NSW7 305 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 GAGE2AQ6NT46 116 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TBPL2Q6SJ96 375 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 ZNF841Q6ZN19 808 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 DHDDSQ86SQ9 333 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 NAA40Q86UY6 237 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 NRMQ8IXM6 262 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 LRRC75AQ8NAA5 344 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 NPEPL1Q8NDH3 523 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 OR8B3Q8NGG8 313 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 OR2AJ1Q8NGZ0 328 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 OR13G1Q8NGZ3 307 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 OR1F12Q8NHA8 337 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 LIPHQ8WWY8 451 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 FAM162AQ96A26 154 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 BPIFA2Q96DR5 249 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TPD52L3Q96J77 140 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 PLEKHA8Q96JA3 519 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 FAM71F1Q96KD3 344 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 ZNF582Q96NG8 517 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 OR8B2Q96RD0 313 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 CCDC28BQ9BUN5 200 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 ALG12Q9BV10 488 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TUBG2Q9NRH3 451 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 UFSP2Q9NUQ7 469 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TMEM100Q9NV29 134 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 GAGE2DQ9UEU5 116 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TMCC3Q9ULS5 477 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TRAV34A0A0B4J273 112 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 A0A0U1RQK1 487 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 GMNCA6NCL1 334 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 A6NIZ1 184 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 LRRC30A6NM36 301 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 EFCAB9A8MZ26 197 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 ZNF879B4DU55 563 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 MLNRO43193 412 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 GPR137BO60478 399 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 SLC16A7O60669 478 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 NDUFA7O95182 113 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 OR5F1O95221 314 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 ACAA1P09110 424 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-219ENST00000494323 COX5BP10606 129 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 FCGR1AP12314 374 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 NR2C1P13056 603 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 CTLA4P16410 223 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 RPL4P36578 427 aaKnown RBP4.22□□□□□ -1.73
PTCD3-219ENST00000494323 CFHR2P36980 270 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 IER3P46695 156 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 SLC9A3P48764 834 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 RAP1BP61224 184 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 RAP1AP62834 184 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 ACSM1Q08AH1 577 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 SCRN3Q0VDG4 424 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 PNRC1Q12796 327 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-219ENST00000494323 MAB21L1Q13394 359 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 MPPED2Q15777 294 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 MEP1BQ16820 701 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 RSPO1Q2MKA7 263 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-219ENST00000494323 PRAMEF6Q5VXH4 476 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 FOXL2NBQ6ZUU3 175 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 CCDC80Q76M96 950 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 CROCCP2Q86T23 111 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 OAFQ86UD1 273 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 OR5L1Q8NGL2 311 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 OR13C2Q8NGS9 318 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 FNDC8Q8TC99 324 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 LRRC8CQ8TDW0 803 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 C10orf82Q8WW14 230 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 RASSF5Q8WWW0 418 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 DYRK2Q92630 601 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 LHX4Q969G2 390 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 TLCD1Q96CP7 247 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 LYZL4Q96KX0 146 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 MAGEB18Q96M61 343 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 Q96M85 177 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 TECTBQ96PL2 329 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 TBX15Q96SF7 602 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 ECSITQ9BQ95 431 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 MMADHCQ9H3L0 296 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-219ENST00000494323 SLA2Q9H6Q3 261 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 TMBIM4Q9HC24 238 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 ACOXLQ9NUZ1 547 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 POMT1Q9Y6A1 747 aa4.22□□□□□ -1.73
PTCD3-219ENST00000494323 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 IGHV1-69DA0A0B4J2H0 117 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF816-ZNF321PA0A0X1KG74 233 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 A0A1W2PRD5 423 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 A0A1W2PRF3 423 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 A0A1W2PRM7 423 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms