RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 OR10A4Q9H209 315 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 OR51V1Q9H2C8 321 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 RERGLQ9H628 205 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 NKIRAS2Q9NYR9 191 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 TVP23BQ9NYZ1 205 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 GDF2Q9UK05 429 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-234ENST00000493923 TMED3Q9Y3Q3 217 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 WDR45Q9Y484 360 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 RNF115Q9Y4L5 304 aa7.11□□□□□ -1.27
HDAC6-234ENST00000493923 MALRD1Q5VYJ5 2156 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 CHD3Q12873 2000 aaKnown RBP7.1□□□□□ -1.27
HDAC6-234ENST00000493923 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.1□□□□□ -1.273e-6■□□□□ 9.9
HDAC6-234ENST00000493923 SVEP1Q4LDE5 3571 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 IGKV3D-15A0A087WSY6 115 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 A0A087X0M5 115 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 A0A1B0GX30 115 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 ANKRD20A5PA0PJZ0 165 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF724A8MTY0 619 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 SULT2B1O00204 365 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 MFNGO00587 321 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 PPIHO43447 177 aaKnown RBP7.1□□□□□ -1.27
HDAC6-234ENST00000493923 NCR1O76036 304 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 AKR7A3O95154 331 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 IGHV4-39P01824 125 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 MT-ND5P03915 603 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 ARAFP10398 606 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 CD79AP11912 226 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 NDUFB7P17568 137 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 CELP19835 753 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 COX5AP20674 150 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 RPS4Y1P22090 263 aaKnown RBP7.1□□□□□ -1.27
HDAC6-234ENST00000493923 MAS1LP35410 378 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 ACVR1BP36896 505 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 RAD52P43351 418 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 NPBWR1P48145 328 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 KHKP50053 298 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 PPT1P50897 306 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 MMP16P51512 607 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 ATP5J2P56134 94 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 CDK6Q00534 326 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 CDK5Q00535 292 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 MADCAM1Q13477 382 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 GINS1Q14691 196 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 PNLIPRP3Q17RR3 467 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF672Q499Z4 452 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-234ENST00000493923 RPS26P11Q5JNZ5 115 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-234ENST00000493923 SLC35D3Q5M8T2 416 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 OR2G6Q5TZ20 316 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 AWAT2Q6E213 333 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 OR10K2Q6IF99 312 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 PGBD2Q6P3X8 592 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 PAQR6Q6TCH4 344 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 B3GLCTQ6Y288 498 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 Q6ZT83 130 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 VRK2Q86Y07 508 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 COMMD1Q8N668 190 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF383Q8NA42 475 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 OR1S2Q8NGQ3 325 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 OR2G2Q8NGZ5 317 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 OR4Q3Q8NH05 313 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 TERB2Q8NHR7 220 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM171Q8WVE6 324 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 TNFAIP8L1Q8WVP5 186 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 RAB40AQ8WXH6 277 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 KISS1RQ969F8 398 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-234ENST00000493923 NRIP2Q9BQI9 281 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 TRIM2Q9C040 744 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 CA10Q9NS85 328 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM100Q9NV29 134 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 RCC2Q9P258 522 aaKnown RBP7.1□□□□□ -1.27
HDAC6-234ENST00000493923 RCE1Q9Y256 329 aa7.1□□□□□ -1.27
HDAC6-234ENST00000493923 FBN3Q75N90 2809 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 TMED7-TICAM2A0A0A6YYA0 188 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 SMIM30A4D0T7 59 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 DUXAA6NLW8 204 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM210A6NLX4 147 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 GJE1A6NN92 205 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 OR2AT4A6NND4 320 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM229AB2RXF0 380 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 E7EQL1 145 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 M0QZK8 103 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 GOSR2O14653 212 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 GGCTO75223 188 aaKnown RBP7.09□□□□□ -1.27
HDAC6-234ENST00000493923 RAD51DO75771 328 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 GATBO75879 557 aaKnown RBP7.09□□□□□ -1.27
HDAC6-234ENST00000493923 RAB3DO95716 219 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 PMS2P2O95744 297 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 CD3EP07766 207 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 MELTFP08582 738 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ITGA5P08648 1049 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 CSF1P09603 554 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 APEHP13798 732 aaKnown RBP7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ETFAP13804 333 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 CBR1P16152 277 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ADCYAP1P18509 176 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 PGCP20142 388 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 RAB5AP20339 215 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 GIPRP48546 466 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF83P51522 516 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 CRYBA2P53672 197 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms