RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 NDUFB7P17568 137 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 OMGP23515 440 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 DGUOKQ16854 277 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 LRRC10Q5BKY1 277 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ZNF684Q5T5D7 378 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ATPAF1Q5TC12 328 aaPredicted RBP8.78□□□□□ -1
COL6A3-214ENST00000493608 FDX2Q6P4F2 183 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ZNF788Q6ZQV5 615 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 KRT74Q7RTS7 529 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 VMO1Q7Z5L0 202 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ZNRF1Q8ND25 227 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 LY6G5BQ8NDX9 201 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 OR8J1Q8NGP2 316 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 OR2T27Q8NH04 317 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ANGPTL6Q8NI99 470 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ZNF671Q8TAW3 534 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 AQP3Q92482 292 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 TMIGD2Q96BF3 282 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 C12orf43Q96C57 262 aaKnown RBP8.78□□□□□ -1
COL6A3-214ENST00000493608 MNTQ99583 582 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ELL3Q9HB65 397 aaPredicted RBP8.78□□□□□ -1
COL6A3-214ENST00000493608 SIRT7Q9NRC8 400 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 V9GYS6 101 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1
COL6A3-214ENST00000493608 IGKV1D-17A0A075B6S4 117 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 IGHV1-69DA0A0B4J2H0 117 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 NKX6-3A6NJ46 265 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 ENTPD6O75354 484 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 INMTO95050 263 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 IGHV1-69P01742 117 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 ALPLP05186 524 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 ACAA1P09110 424 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-214ENST00000493608 PSG2P11465 335 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 HAAOP46952 286 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 CEBPDP49716 269 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-214ENST00000493608 CDC42P60953 191 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 IL13RA1P78552 427 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 PDCD1Q15116 288 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 CDONQ4KMG0 1287 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 TP53I3Q53FA7 332 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 CLVS2Q5SYC1 327 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 C16orf87Q6PH81 154 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 Q6YL49 198 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 CATSPERDQ86XM0 798 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 ANGPTL5Q86XS5 388 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 RDH10Q8IZV5 341 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 TRMT10AQ8TBZ6 339 aaKnown RBP8.77□□□□□ -1.01
COL6A3-214ENST00000493608 NPRL2Q8WTW4 380 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 GATAD2BQ8WXI9 593 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 RORBQ92753 470 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 MED30Q96HR3 178 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 DCTN5Q9BTE1 182 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 MOB1AQ9H8S9 216 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 IMPAD1Q9NX62 359 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 SLC25A10Q9UBX3 287 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-214ENST00000493608 ORC6Q9Y5N6 252 aa8.77□□□□□ -1.01
COL6A3-214ENST00000493608 A0A0U1RQK1 487 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 A0A1W2PQ09 198 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 OR5B21A6NL26 309 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 RFPL4AA6NLU0 287 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 RFPL4AL1F8VTS6 287 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 SIGLEC5O15389 551 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 CAPZA1P52907 286 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 ZNF85Q03923 595 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 FOXL1Q12952 345 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 KLRD1Q13241 179 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 ZBTB37Q5TC79 503 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 TMEM42Q69YG0 159 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 ACP7Q6ZNF0 438 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 PRSS35Q8N3Z0 413 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 PNKDQ8N490 385 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 CBR4Q8N4T8 237 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 Q8N7P7 452 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 TMEM185AQ8NFB2 350 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 DNTTIP1Q9H147 329 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 ACOXLQ9NUZ1 547 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 GNG8Q9UK08 70 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 MAB21L2Q9Y586 359 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 KPTNQ9Y664 436 aa8.76□□□□□ -1.01
COL6A3-214ENST00000493608 A0A1B0GVI7 797 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 FAM230AA0A1W2PPH8 454 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 PQLC2LA1A4F0 135 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 CLDN34H7C241 214 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 DLGAP1O14490 977 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 SYT7O43581 403 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 MELTFP08582 738 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 KIR3DL2P43630 455 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 BPIFB3P59826 476 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 ZFP1Q6P2D0 407 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 FIP1L1Q6UN15 594 aaKnown RBP8.75□□□□□ -1.01
COL6A3-214ENST00000493608 ZNF573Q86YE8 665 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 CALHM1Q8IU99 346 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 CD177Q8N6Q3 437 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 POC1AQ8NBT0 407 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 RFKQ969G6 155 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 RNFT2Q96EX2 444 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 HRASLS5Q96KN8 279 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 MBOAT4Q96T53 435 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 SLC29A1Q99808 456 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms