RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 GCH1P30793 250 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 MPV17P39210 176 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 POU3F4P49335 361 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 RAG2P55895 527 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 PSG7Q13046 419 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 PRDX4Q13162 271 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 KLF9Q13886 244 aaPredicted RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 MBNL2Q5VZF2 373 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 CD276Q5ZPR3 534 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 RGS7BPQ6MZT1 257 aaPredicted RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 OR4D6Q8NGJ1 314 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 SLC25A28Q96A46 364 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 BORCS8Q96FH0 119 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 NUDT15Q9NV35 164 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 MRPL15Q9P015 296 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 GPR160Q9UJ42 338 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 MPC1Q9Y5U8 109 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 LOC100289279A0A1B0GTE1 492 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 FAM230AA0A1W2PPH8 454 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 DPRXA6NFQ7 191 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 IQCF6A8MYZ5 107 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 SMLR1H3BR10 107 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 CLDN14O95500 239 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 GLRXP35754 106 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 RBP2P50120 134 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 FABP6P51161 128 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 FUT6P51993 359 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 MTCP1P56278 107 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 RPS23P62266 143 aaKnown RBP12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 NKX6-1P78426 367 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 BSPH1Q075Z2 132 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 TFF3Q07654 80 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 C2orf76Q3KRA6 126 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 RNASE12Q5GAN4 147 aaKnown RBP12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 LHFPL2Q6ZUX7 228 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 BTN2A1Q7KYR7 527 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 CMTM4Q8IZR5 234 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 PIAS4Q8N2W9 510 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 ITLN2Q8WWU7 325 aaPredicted RBP12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 CACNG6Q9BXT2 260 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 CRIM1Q9NZV1 1036 aa12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 MRPS7Q9Y2R9 242 aaKnown RBP12.06□□□□□ -0.48
PDZRN3-210ENST00000492909 ADGRG4Q8IZF6 3080 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 ABCD4O14678 606 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 LILRA1O75019 489 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 KITLGP21583 273 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 GIFP27352 417 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 SNTB1Q13884 538 aaKnown RBP12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 AWAT2Q6E213 333 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 RNF144BQ7Z419 303 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 ANGPTL5Q86XS5 388 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 LINC01560Q8TB33 94 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 HIST1H2AAQ96QV6 131 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 OR51J1Q9H342 316 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 ESRP2Q9H6T0 727 aaKnown RBP12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 PURGQ9UJV8 347 aaKnown RBP12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 ING4Q9UNL4 249 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 MRPS28Q9Y2Q9 187 aaKnown RBP12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 TUBAL3A6NHL2 446 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 AKR7A2O43488 359 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 BPNT1O95861 308 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 H2AFB2P0C5Z0 115 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 PTGFRP43088 359 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 OR3A4PP47883 348 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 ATP1B3P54709 279 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 CEACAM21Q3KPI0 293 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 CRIP3Q6Q6R5 217 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF767PQ75MW2 155 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 CDH24Q86UP0 819 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 C9orf62Q8N4C0 152 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 NUP37Q8NFH4 326 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 OR11H7Q8NGC8 314 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 OR5D18Q8NGL1 313 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
PDZRN3-210ENST00000492909 SPTBN1Q01082 2364 aaKnown RBP12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 IGKV1-27A0A075B6S5 117 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 TMEM272A0A1B0GTI8 110 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 CLEC18AA5D8T8 446 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 FABP7O15540 132 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 TIMM8AO60220 97 aaPredicted RBP12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 MT-ND4P03905 459 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF250P15622 560 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 CA6P23280 308 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 GDNFP39905 211 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 ART1P52961 327 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 ALKBH6Q3KRA9 238 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 TMEM255AQ5JRV8 349 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 THOC7Q6I9Y2 204 aaKnown RBP12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 VHLLQ6RSH7 139 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 GLIPR1L1Q6UWM5 242 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 CLEC18BQ6UXF7 455 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 CLEC18CQ8NCF0 446 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 OR8G5Q8NG78 346 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 OR5A2Q8NGI9 324 aa12.04□□□□□ -0.48
PDZRN3-210ENST00000492909 SYNPRQ8TBG9 265 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms