RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GAGE2BQ13066 116 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 P2RY6Q15077 328 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 CSRP2Q16527 193 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GAGE2EQ4V326 116 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 PHLDA2Q53GA4 152 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 NHLRC3Q5JS37 347 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 FAM74A1Q5RGS3 127 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 C6orf52Q5T4I8 152 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 TEX36Q5VZQ5 186 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OR10K2Q6IF99 312 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GAGE2AQ6NT46 116 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 UGT2A3Q6UWM9 527 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 DHRS11Q6UWP2 260 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 FAM231DQ6ZW35 169 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OAFQ86UD1 273 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 VKORC1L1Q8N0U8 176 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GPD1LQ8N335 351 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 PNKDQ8N490 385 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OR8G5Q8NG78 346 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OR52L1Q8NGH7 329 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 OR5W2Q8NH69 310 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 MCFD2Q8NI22 146 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 DOK4Q8TEW6 326 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 DEDD2Q8WXF8 326 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 DCUN1D4Q92564 292 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 TADA1Q96BN2 335 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 PPCDCQ96CD2 204 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 AURKBQ96GD4 344 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-220ENST00000492859 PCED1BQ96HM7 432 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 ST6GAL2Q96JF0 529 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 LXNQ9BS40 222 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 AGMATQ9BSE5 352 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 CABLES2Q9BTV7 478 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 SLC25A39Q9BZJ4 359 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-220ENST00000492859 PELI2Q9HAT8 420 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GALPQ9UBC7 116 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GAGE2DQ9UEU5 116 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 TRAPPC2LQ9UL33 140 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 SLC7A7Q9UM01 511 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 ST3GAL6Q9Y274 331 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 EXOSC1Q9Y3B2 195 aaKnown RBP3.59□□□□□ -1.83
BRCA1-220ENST00000492859 PIK3C2GO75747 1445 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 GRIN2AQ12879 1464 aa3.59□□□□□ -1.83
BRCA1-220ENST00000492859 DOCK3Q8IZD9 2030 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 TRAV36DV7A0A075B6V5 113 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 BORCS7-ASMTA0A0B4J1R7 106 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 A0A0G2JLM5 398 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 A0A1B0GTH9 108 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 TCRBV9S1A1TA0A576 114 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 C15orf61A6NNL5 157 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 E7EQ34 232 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 NPIPB9F8W1W9 429 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 UBFD1O14562 309 aaKnown RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 FABP7O15540 132 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 MRPS14O60783 128 aaKnown RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 CLIC3O95833 236 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 HPRT1P00492 218 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 OPN1SWP03999 348 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 CRYBA1P05813 215 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 PSG2P11465 335 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 EDNRAP25101 427 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 NPY1RP25929 384 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 HRH1P35367 487 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 TSFMP43897 325 aaKnown RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 RFX2P48378 723 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF84P51523 738 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SSR4P51571 173 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 HSPE1P61604 102 aaKnown RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 RHOGP84095 191 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 HIST1H1AQ02539 215 aaPredicted RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SMAGPQ0VAQ4 97 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF181Q2M3W8 571 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SLC25A35Q3KQZ1 300 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 FAM27D1Q5T7N8 215 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 GGNBP1Q5YKI7 109 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 ALKAL1Q6UXT8 129 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 C9orf139Q6ZV77 190 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 CHMP1BQ7LBR1 199 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 COX8CQ7Z4L0 72 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 OR8I2Q8N0Y5 310 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 OR1N2Q8NGR9 330 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 HMGCLL1Q8TB92 370 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 RDH11Q8TC12 318 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 CD99L2Q8TCZ2 262 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 GPR148Q8TDV2 347 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 RNF128Q8TEB7 428 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SLC37A2Q8TED4 501 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SLC25A43Q8WUT9 341 aaPredicted RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 LCN9Q8WX39 176 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 DDIT4LQ96D03 193 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SCGB3A2Q96PL1 93 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 F2RL3Q96RI0 385 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 GFM1Q96RP9 751 aaKnown RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 PRR25Q96S07 402 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 ATOH8Q96SQ7 321 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SYT3Q9BQG1 590 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 REG4Q9BYZ8 158 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 C20orf27Q9GZN8 174 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 Q9H521 79 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms