RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 OR10R2Q8NGX6 335 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 SETD6Q8TBK2 473 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 GTF3AQ92664 365 aaKnown RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 UPRTQ96BW1 309 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 NKX2-6A6NCS4 301 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 RHBDL1O75783 438 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 CSTBP04080 98 aaKnown RBP11.91□□□□□ -0.5
SMPD4-219ENST00000491128 OR52W1Q6IF63 320 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 HAGHLQ6PII5 290 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-219ENST00000491128 BAIAP2L2Q6UXY1 529 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 LHFPL2Q6ZUX7 228 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 C6orf201Q7Z4U5 140 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 C17orf78Q8N4C9 275 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 MARS2Q96GW9 593 aaKnown RBP11.91□□□□□ -0.5
SMPD4-219ENST00000491128 PLCE1Q9P212 2302 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
SMPD4-219ENST00000491128 CTDSPLO15194 276 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 GSTZ1O43708 216 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-219ENST00000491128 TMEM127O75204 238 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 BLVRBP30043 206 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-219ENST00000491128 CEACAM21Q3KPI0 293 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 ZNF260Q3ZCT1 412 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 FBXL14Q8N1E6 418 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 DMRTA2Q96SC8 542 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 HRASLSQ9HDD0 168 aa11.91□□□□□ -0.5
SMPD4-219ENST00000491128 ZNF230Q9UIE0 474 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-219ENST00000491128 PQLC2LA1A4F0 135 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 M0QYG6 137 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 RBBP9O75884 186 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 ALX3O95076 343 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 CD3DP04234 171 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-219ENST00000491128 RAB6AP20340 208 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 BCL3P20749 454 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 RPS27AP62979 156 aaKnown RBP11.9□□□□□ -0.5
SMPD4-219ENST00000491128 RSBN1Q5VWQ0 802 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-219ENST00000491128 MRGPRGQ86SM5 289 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 WDR86Q86TI4 376 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 CCDC54Q8NEL0 328 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 HIST1H2AAQ96QV6 131 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 HDHD3Q9BSH5 251 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-219ENST00000491128 CST11Q9H112 138 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 METTL9Q9H1A3 318 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 FLVCR2Q9UPI3 526 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
SMPD4-219ENST00000491128 A0A0B4J293 547 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 FAM221AA4D161 298 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 C16orf97H3BN30 126 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 GRPP07492 148 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 GTF2F2P13984 249 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 FBXW12Q6X9E4 464 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 CSNK2A3Q8NEV1 391 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 OR5P3Q8WZ94 311 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 VKORC1Q9BQB6 163 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 SYT3Q9BQG1 590 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 OBP2BQ9NPH6 170 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 MTCH1Q9NZJ7 389 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 AMDHD2Q9Y303 409 aa11.9□□□□□ -0.5
SMPD4-219ENST00000491128 PKDREJQ9NTG1 2253 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 HSPB6O14558 160 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 CST4P01036 141 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 PLET1Q6UQ28 207 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 TRAPPC6BQ86SZ2 158 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 OR56B4Q8NH76 319 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 C17orf50Q8WW18 174 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 PTX4Q96A99 478 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 NUDT15Q9NV35 164 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 RBMX2Q9Y388 322 aaKnown RBP11.89□□□□□ -0.51
SMPD4-219ENST00000491128 H7C417 338 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 TIMM8AO60220 97 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-219ENST00000491128 SSX5O60225 188 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 SLC6A1P30531 599 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 CA7P43166 264 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 RAD52P43351 418 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 SIGIRRQ6IA17 410 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 SEZ6L2Q6UXD5 910 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 CDH26Q8IXH8 852 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 FTMTQ8N4E7 242 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 KDF1Q8NAX2 398 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-219ENST00000491128 ST6GALNAC3Q8NDV1 305 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 PRR7Q8TB68 274 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 AQP3Q92482 292 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 BOD1Q96IK1 185 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 MTFP1Q9UDX5 166 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 ST3GAL6Q9Y274 331 aa11.89□□□□□ -0.51
SMPD4-219ENST00000491128 SPTAN1Q13813 2472 aaKnown RBP11.89□□□□□ -0.51
SMPD4-219ENST00000491128 F5H5P2 479 aa11.88□□□□□ -0.51
SMPD4-219ENST00000491128 CRYAAP02489 173 aa11.88□□□□□ -0.51
SMPD4-219ENST00000491128 THBDP07204 575 aa11.88□□□□□ -0.51
SMPD4-219ENST00000491128 CASP6P55212 293 aa11.88□□□□□ -0.51
SMPD4-219ENST00000491128 NKPD1Q17RQ9 610 aa11.88□□□□□ -0.51
SMPD4-219ENST00000491128 Q6ZR03 302 aa11.88□□□□□ -0.51
SMPD4-219ENST00000491128 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
SMPD4-219ENST00000491128 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms