RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 YIPF6Q96EC8 236 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 TVP23CQ96ET8 276 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 ZNF649Q9BS31 505 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 FBXO44Q9H4M3 255 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 SND1-IT1Q9HBX3 110 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 CFL2Q9Y281 166 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 SLC22A7Q9Y694 548 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 ELP1O95163 1332 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 NID2Q14112 1375 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 KIAA1671Q9BY89 1806 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 A0A1W2PPV4 95 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 FSTL3O95633 263 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 SNAI1O95863 264 aaPredicted RBP1.9□□□□□ -2.11
CD46-216ENST00000490278 NRASP01111 189 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 HRASP01112 189 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 KRASP01116 189 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 OR4Q2P0C623 313 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 HOXB8P17481 243 aaPredicted RBP1.9□□□□□ -2.11
CD46-216ENST00000490278 OR12D2P58182 307 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 BIKQ13323 160 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 TAF9Q16594 264 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 CDNFQ49AH0 187 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 TTC32Q5I0X7 151 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 SPIN3Q5JUX0 258 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 EPGNQ6UW88 154 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 TRMT10CQ7L0Y3 403 aaKnown RBP1.9□□□□□ -2.11
CD46-216ENST00000490278 ARHGAP18Q8N392 663 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 ZNF321PQ8N8H1 164 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 OR51A7Q8NH64 312 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 FAM57AQ8TBR7 257 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 TOP1MTQ969P6 601 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 ZBED3Q96IU2 234 aaPredicted RBP1.9□□□□□ -2.11
CD46-216ENST00000490278 DERL3Q96Q80 235 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 BCL7BQ9BQE9 202 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 TDRD3Q9H7E2 651 aaKnown RBP1.9□□□□□ -2.11
CD46-216ENST00000490278 ZNF391Q9UJN7 358 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 TFR2Q9UP52 801 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 SLC7A11Q9UPY5 501 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 ORC6Q9Y5N6 252 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 C2orf16Q68DN1 1984 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 SHROOM3Q8TF72 1996 aa1.9□□□□□ -2.11
CD46-216ENST00000490278 IZUMO1RA6ND01 250 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 CBR3O75828 277 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 OR5AL1P0C617 328 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 OR5AC1P0C628 307 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 P0C880 135 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 INAFM2P0DMQ5 153 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 RPL31P62899 125 aaKnown RBP1.89□□□□□ -2.11
CD46-216ENST00000490278 MEF2CQ06413 473 aaPredicted RBP1.89□□□□□ -2.11
CD46-216ENST00000490278 PMVKQ15126 192 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 FAM27D1Q5T7N8 215 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 DUPD1Q68J44 220 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 APOBEC3HQ6NTF7 200 aaKnown RBP1.89□□□□□ -2.11
CD46-216ENST00000490278 ASCL4Q6XD76 172 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 ITPRIPQ8IWB1 547 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 ZNF664Q8N3J9 261 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 OR4D6Q8NGJ1 314 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 YIPF5Q969M3 257 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 FAM131CQ96AQ9 280 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 CENPNQ96H22 339 aaPredicted RBP1.89□□□□□ -2.11
CD46-216ENST00000490278 RNF170Q96K19 258 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 C20orf144Q9BQM9 153 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 TMED9Q9BVK6 235 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 MRPL20Q9BYC9 149 aaKnown RBP1.89□□□□□ -2.11
CD46-216ENST00000490278 OR2S2Q9NQN1 319 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 ZNF302Q9NR11 478 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 INIPQ9NRY2 104 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 TAS2R1Q9NYW7 299 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 FLVCR2Q9UPI3 526 aa1.89□□□□□ -2.11
CD46-216ENST00000490278 AQRO60306 1485 aaKnown RBP eCLIP1.88□□□□□ -2.11
CD46-216ENST00000490278 FAM240AA0A1B0GVK7 77 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 A0A1W2PNN7 141 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 GATCO43716 136 aaKnown RBP1.88□□□□□ -2.11
CD46-216ENST00000490278 KCNK2O95069 426 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 KLHL2O95198 593 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 IGLV6-57P01721 117 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 CRYGCP07315 174 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 SNRPAP09012 282 aaKnown RBP1.88□□□□□ -2.11
CD46-216ENST00000490278 SEC11BP0C7V7 166 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 ZNF35P13682 527 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 CD9P21926 228 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 TUFMP49411 452 aaKnown RBP1.88□□□□□ -2.11
CD46-216ENST00000490278 RPL10AP62906 217 aaKnown RBP1.88□□□□□ -2.11
CD46-216ENST00000490278 IFFO1Q0D2I5 559 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 NKAIN1Q4KMZ8 207 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 MRPL2Q5T653 305 aaKnown RBP1.88□□□□□ -2.11
CD46-216ENST00000490278 CLEC19AQ6UXS0 136 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 ADM2Q7Z4H4 148 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 NDNFQ8TB73 568 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 NT5CQ8TCD5 201 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 PEBP4Q96S96 227 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 TM2D3Q9BRN9 247 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 CHID1Q9BWS9 393 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 COA1Q9GZY4 146 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 CHRNA10Q9GZZ6 450 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 TRIM45Q9H8W5 580 aaPredicted RBP1.88□□□□□ -2.11
CD46-216ENST00000490278 RDH14Q9HBH5 336 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 FAM60AQ9NP50 221 aa1.88□□□□□ -2.11
CD46-216ENST00000490278 ZNF492Q9P255 531 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms