RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 DYNLT3P51808 116 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 MOB3CQ70IA8 216 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 POC1AQ8NBT0 407 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 OR2T33Q8NG76 320 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 OR11H6Q8NGC7 330 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 OR5A2Q8NGI9 324 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 MYDGFQ969H8 173 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 HILPDAQ9Y5L2 63 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 DSCAML1Q8TD84 2053 aa11.19□□□□□ -0.62
VARS-227ENST00000489979 MEX3AA1L020 520 aaKnown RBP11.18□□□□□ -0.62
VARS-227ENST00000489979 RIIAD1A6NNX1 92 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 TNFRSF11BO00300 401 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 CCDC22O60826 627 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 TK1P04183 234 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 LYNP07948 512 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 MAP2K3P46734 347 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 HMGA2P52926 109 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 OR12D2P58182 307 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 PSMA6P60900 246 aaKnown RBP11.18□□□□□ -0.62
VARS-227ENST00000489979 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 DYNC1I2Q13409 638 aaKnown RBP11.18□□□□□ -0.62
VARS-227ENST00000489979 ZNF770Q6IQ21 691 aaPredicted RBP11.18□□□□□ -0.62
VARS-227ENST00000489979 LCN8Q6JVE9 175 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 KRT74Q7RTS7 529 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 HDXQ7Z353 690 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 BATF2Q8N1L9 274 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 AQP11Q8NBQ7 271 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 THEM6Q8WUY1 208 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 NSMCE2Q96MF7 247 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 VIPAS39Q9H9C1 493 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 TAS2R1Q9NYW7 299 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 OR14J1Q9UGF5 321 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 MAGEL2Q9UJ55 1249 aa11.18□□□□□ -0.62
VARS-227ENST00000489979 RYR2Q92736 4967 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 OR5B21A6NL26 309 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 SELENOFO60613 162 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 CCNB2O95067 398 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 CLIC3O95833 236 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 PGA5P0DJD9 388 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 KHDC1LQ5JSQ8 128 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 PLCXD3Q63HM9 321 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 OTOSQ8NHW6 89 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 DPF1Q92782 380 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 OR8B4Q96RC9 309 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 OR51V1Q9H2C8 321 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 NIPAL2Q9H841 368 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 CMC2Q9NRP2 79 aa11.17□□□□□ -0.62
VARS-227ENST00000489979 HUWE1Q7Z6Z7 4374 aaKnown RBP11.16□□□□□ -0.62
VARS-227ENST00000489979 FAM90A22PA8MWA6 464 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 NXPH2O95156 264 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 RBP4P02753 201 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 ZNF728P0DKX0 622 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 AZGP1P25311 298 aaKnown RBP11.16□□□□□ -0.62
VARS-227ENST00000489979 RIPPLY1Q0D2K3 151 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 PPP1R8Q12972 351 aaKnown RBP11.16□□□□□ -0.62
VARS-227ENST00000489979 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 NDNFQ8TB73 568 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 GPR61Q9BZJ8 451 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 KLHDC2Q9Y2U9 406 aa11.16□□□□□ -0.62
VARS-227ENST00000489979 A0A0U1RQV5 110 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 H3BUI4 141 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 J3QT63 122 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 K7N7A8 449 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 ARPC2O15144 300 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 NOS1APO75052 506 aaPredicted RBP11.15□□□□□ -0.62
VARS-227ENST00000489979 HSD17B1P14061 328 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 HAAOP46952 286 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 MINOS1Q5TGZ0 78 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 TRPM8Q7Z2W7 1104 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 RNF144BQ7Z419 303 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 COMMD2Q86X83 199 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 IQCF1Q8N6M8 205 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 ASCC1Q8N9N2 400 aaKnown RBP11.15□□□□□ -0.62
VARS-227ENST00000489979 CMTM5Q96DZ9 223 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 NRIP2Q9BQI9 281 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 CHID1Q9BWS9 393 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 PIGLQ9Y2B2 252 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 MINOS1-NBL1R4GNA1 71 aa11.15□□□□□ -0.62
VARS-227ENST00000489979 EPPK1P58107 5090 aaKnown RBP11.14□□□□□ -0.63
VARS-227ENST00000489979 GSC2O15499 205 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 LPLP06858 475 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 CHRM2P08172 466 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 ATP6V1B1P15313 513 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 CD24P25063 80 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 EDDM3BP56851 147 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 ACTA2P62736 377 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 ACTG2P63267 376 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 ACTC1P68032 377 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 ACTA1P68133 377 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 COL10A1Q03692 680 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 DCTN2Q13561 401 aaKnown RBP11.14□□□□□ -0.63
VARS-227ENST00000489979 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 ZNF684Q5T5D7 378 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 C16orf82Q7Z2V1 217 aa11.14□□□□□ -0.63
VARS-227ENST00000489979 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms