RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LINC00471Q8N535 108 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 OR8U1Q8NH10 309 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 OR10A6Q8NH74 314 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 GATAD1Q8WUU5 269 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 OR5P3Q8WZ94 311 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 TRIM63Q969Q1 353 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SGK3Q96BR1 496 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 HRASLS5Q96KN8 279 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 PAIP2Q9BPZ3 127 aaKnown RBP7.18□□□□□ -1.26
SSBP1-212ENST00000489378 C1orf21Q9H246 121 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 DCLRE1BQ9H816 532 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 THAP1Q9NVV9 213 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SIGLEC7Q9Y286 467 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SNX5Q9Y5X3 404 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 hCG_38984A0A1B0GV85 526 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 RFPL4AA6NLU0 287 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 TMEM210A6NLX4 147 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ANXA2P2A6NMY6 339 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ZNF850A8MQ14 1090 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 RFPL4AL1F8VTS6 287 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 J3KTA2 159 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 FFAR1O14842 300 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SLC22A2O15244 555 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 MTRF1O75570 445 aaKnown RBP7.18□□□□□ -1.26
SSBP1-212ENST00000489378 NDUFB2O95178 105 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 TXNDC12O95881 172 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 HLA-DQA2P01906 255 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 TROVE2P10155 538 aaKnown RBP eCLIP7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SPNP16150 400 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SLC7A2P52569 658 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 FXYD6P3P58550 94 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ACTA2P62736 377 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ACTG2P63267 376 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ACTC1P68032 377 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ACTA1P68133 377 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 PRDX4Q13162 271 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 FAM76BQ5HYJ3 339 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ZNF730Q6ZMV8 503 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 MBOAT2Q6ZWT7 520 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 CALHM1Q8IU99 346 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 CHPT1Q8WUD6 406 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 HPSE2Q8WWQ2 592 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 STMN2Q93045 179 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 RNFT2Q96EX2 444 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 REEP6Q96HR9 211 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 RNF170Q96K19 258 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 GPX7Q96SL4 187 aaPredicted RBP7.18□□□□□ -1.26
SSBP1-212ENST00000489378 NMNAT3Q96T66 252 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 COPS4Q9BT78 406 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 KRTAP4-2Q9BYR5 136 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 NDEL1Q9GZM8 345 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 NSRP1Q9H0G5 558 aaKnown RBP7.18□□□□□ -1.26
SSBP1-212ENST00000489378 FN3KQ9H479 309 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 RPRD1BQ9NQG5 326 aaKnown RBP7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SNX13Q9Y5W8 968 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 IGHV2-26A0A0B4J1V2 119 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 ZNF728P0DKX0 622 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 KIR2DS1Q14954 304 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 TRAM2Q15035 370 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 TIGD6Q17RP2 521 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 AGKQ53H12 422 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 FAM27D1Q5T7N8 215 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 ZDHHC21Q8IVQ6 265 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 RNF113BQ8IZP6 322 aaKnown RBP7.17□□□□□ -1.26
SSBP1-212ENST00000489378 OFCC1Q8IZS5 231 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 EIF1ADQ8N9N8 165 aaKnown RBP7.17□□□□□ -1.26
SSBP1-212ENST00000489378 OR4P4Q8NGL7 312 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 LZICQ8WZA0 190 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 CGREF1Q99674 301 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 FNDC11Q9BVV2 318 aa7.17□□□□□ -1.26
SSBP1-212ENST00000489378 ROPN1BQ9BZX4 212 aaPredicted RBP7.17□□□□□ -1.26
SSBP1-212ENST00000489378 ROPN1Q9HAT0 212 aaPredicted RBP7.17□□□□□ -1.26
SSBP1-212ENST00000489378 MUC4Q99102 2169 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 SERPINE3A8MV23 424 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 SLC1A7O00341 560 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 LY6G6CO95867 125 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 RBP4P02753 201 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 HTR1DP28221 377 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 PRDX2P32119 198 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 BRS3P32247 399 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 RPS6KA3P51812 740 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 IL18R1Q13478 541 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 SNAPC1Q16533 368 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 CYBRD1Q53TN4 286 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 EPGNQ6UW88 154 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 DPY19L2P2Q6ZN68 376 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 ACP7Q6ZNF0 438 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 TCF23Q7RTU1 214 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 DCXRQ7Z4W1 244 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 SATL1Q86VE3 508 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 MREGQ8N565 214 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 ZNF561Q8N587 486 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 CSNK2A3Q8NEV1 391 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 OR4K13Q8NH42 304 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 TPD52L3Q96J77 140 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 ZNF488Q96MN9 340 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 KCNJ15Q99712 375 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 SSU72Q9NP77 194 aaKnown RBP7.16□□□□□ -1.26
SSBP1-212ENST00000489378 CENPMQ9NSP4 180 aa7.16□□□□□ -1.26
SSBP1-212ENST00000489378 ZNF319Q9P2F9 582 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms