RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 OR52L1Q8NGH7 329 aa12.88□□□□□ -0.35
USP48-210ENST00000489108 OR6N2Q8NGY6 317 aa12.88□□□□□ -0.35
USP48-210ENST00000489108 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
USP48-210ENST00000489108 DNAH1Q9P2D7 4330 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 H2BFMP0C1H6 154 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 ZNF728P0DKX0 622 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 IGHV1-8P0DP01 117 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 LINC01590Q5TEZ4 76 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 MINOS1Q5TGZ0 78 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 GLYATQ6IB77 296 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 C18orf65Q6ZTR6 163 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 C16orf82Q7Z2V1 217 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 ERI1Q8IV48 349 aaKnown RBP12.87□□□□□ -0.35
USP48-210ENST00000489108 POC1AQ8NBT0 407 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 OR8D4Q8NGM9 314 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 NDNFQ8TB73 568 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 OR8B4Q96RC9 309 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 KCTD14Q9BQ13 255 aaPredicted RBP12.87□□□□□ -0.35
USP48-210ENST00000489108 DCAF13Q9NV06 445 aaKnown RBP12.87□□□□□ -0.35
USP48-210ENST00000489108 CDH10Q9Y6N8 788 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 MINOS1-NBL1R4GNA1 71 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 V9GYQ6 96 aa12.87□□□□□ -0.35
USP48-210ENST00000489108 LCE6AA0A183 80 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 RAMP3O60896 148 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 AMY1AP04745 511 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 AMY2AP04746 511 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 ACTA2P62736 377 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 ACTG2P63267 376 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 ACTC1P68032 377 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 ACTA1P68133 377 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 MOB3CQ70IA8 216 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.86□□□□□ -0.35
USP48-210ENST00000489108 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 OR5A2Q8NGI9 324 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 CAPSLQ8WWF8 208 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 AKR1E2Q96JD6 320 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 PRR25Q96S07 402 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 HOPXQ9BPY8 73 aaPredicted RBP12.86□□□□□ -0.35
USP48-210ENST00000489108 LIN7BQ9HAP6 207 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 VNN3Q9NY84 501 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 IL20Q9NYY1 176 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 OR14J1Q9UGF5 321 aa12.86□□□□□ -0.35
USP48-210ENST00000489108 RBP4P02753 201 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 MYCNOSP40205 109 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 MAP2K3P46734 347 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 NUDT2P50583 147 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 BLVRAP53004 296 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
USP48-210ENST00000489108 C9orf152Q5JTZ5 239 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 C8orf82Q6P1X6 216 aaPredicted RBP12.85□□□□□ -0.35
USP48-210ENST00000489108 C8orf86Q6ZUL3 223 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 KRT74Q7RTS7 529 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 ZNF329Q86UD4 541 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 OSR2Q8N2R0 312 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 OR8B12Q8NGG6 310 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 FAM81AQ8TBF8 368 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 STMN2Q93045 179 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 INTS14Q96SY0 518 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 SLC25A33Q9BSK2 321 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 KRTAP17-1Q9BYP8 105 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 TBC1D23Q9NUY8 699 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 SAMD4AQ9UPU9 718 aaKnown RBP12.85□□□□□ -0.35
USP48-210ENST00000489108 DNAH7Q8WXX0 4024 aa12.85□□□□□ -0.35
USP48-210ENST00000489108 OR5B21A6NL26 309 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 K7N7A8 449 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 PGA5P0DJD9 388 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 RRM2P31350 389 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 EDDM3BP56851 147 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 SHFQ7M4L6 423 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 OR4Q3Q8NH05 313 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 RP9Q8TA86 221 aaKnown RBP12.84□□□□□ -0.35
USP48-210ENST00000489108 P2RX4Q99571 388 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 TSSK6Q9BXA6 273 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 MED20Q9H944 212 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
USP48-210ENST00000489108 IGHV2-26A0A0B4J1V2 119 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 PSMB11A5LHX3 300 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 NOS1APO75052 506 aaPredicted RBP12.83□□□□□ -0.36
USP48-210ENST00000489108 NXPH2O95156 264 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 SEMG1P04279 462 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 GSTT1P30711 240 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 PLCXD3Q63HM9 321 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
USP48-210ENST00000489108 TCF23Q7RTU1 214 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 OR2W3Q7Z3T1 314 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 THEM6Q8WUY1 208 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 PYURFQ96I23 114 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 ZNF714Q96N38 554 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 RBM14Q96PK6 669 aaKnown RBP12.83□□□□□ -0.36
USP48-210ENST00000489108 DUX3Q96PT4 197 aa12.83□□□□□ -0.36
USP48-210ENST00000489108 NUDT19A8MXV4 375 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 OR2F2O95006 317 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 LYL1P12980 280 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 COX4I1P13073 169 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 HTR1DP28221 377 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 HAAOP46952 286 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms