RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SMIM21Q3B7S5 101 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 Q6ZSR3 168 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 ZNF573Q86YE8 665 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 TNFRSF14Q92956 283 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 SDSLQ96GA7 329 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 OSBPL10Q9BXB5 764 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 SLITRK2Q9H156 845 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 ZNF696Q9H7X3 374 aa18.87■□□□□ 0.61
COL9A3-213ENST00000489045 A0A1W2PRD5 423 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 A0A1W2PRF3 423 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 A0A1W2PRM7 423 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 PQLC2LA1A4F0 135 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 M0R1W7 72 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 NDUFA7O95182 113 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 OR2T7P0C7T2 308 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 PGA5P0DJD9 388 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 EEF1B2P24534 225 aaKnown RBP18.86■□□□□ 0.61
COL9A3-213ENST00000489045 ODF4Q2M2E3 257 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 ASRGL1Q7L266 308 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 OR10H4Q8NGA5 316 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 OR8J1Q8NGP2 316 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 OR2T27Q8NH04 317 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 NPRL2Q8WTW4 380 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 DYRK2Q92630 601 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 RBM4BQ9BQ04 359 aaKnown RBP18.86■□□□□ 0.61
COL9A3-213ENST00000489045 BEX1Q9HBH7 125 aa18.86■□□□□ 0.61
COL9A3-213ENST00000489045 CAB39Q9Y376 341 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-213ENST00000489045 A0A1B0GUS0 222 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 RFPL4AA6NLU0 287 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 DHRS7CA6NNS2 312 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 RFPL4AL1F8VTS6 287 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 NPFFO15130 113 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 GPR137BO60478 399 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 KNG1P01042 644 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 FBP1P09467 338 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 CCL1P22362 96 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 CAPZA1P52907 286 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 C1orf122Q6ZSJ8 110 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 CATSPERDQ86XM0 798 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 PNKDQ8N490 385 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 CD177Q8N6Q3 437 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 PYDC1Q8WXC3 89 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 EME1Q96AY2 570 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 METTL8Q9H825 291 aaKnown RBP18.85■□□□□ 0.61
COL9A3-213ENST00000489045 ZNRD1Q9P1U0 126 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 POLDIP2Q9Y2S7 368 aa18.85■□□□□ 0.61
COL9A3-213ENST00000489045 TRRAPQ9Y4A5 3859 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 MEGF8Q7Z7M0 2845 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 TRBV23-1A0A0A0MS06 115 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 METTL15A6NJ78 407 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 H3BSH0 61 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 RPL15P61313 204 aaKnown RBP18.84■□□□□ 0.61
COL9A3-213ENST00000489045 FAM185AQ8N0U4 392 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 BATF2Q8N1L9 274 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 WFDC12Q8WWY7 111 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 RORBQ92753 470 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 DPAGT1Q9H3H5 408 aa18.84■□□□□ 0.61
COL9A3-213ENST00000489045 ANKRD61A6NGH8 418 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 NOS1APO75052 506 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-213ENST00000489045 NXPH2O95156 264 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 SAA4P35542 130 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 ATP6V1E1P36543 226 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 CEBPDP49716 269 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-213ENST00000489045 UBE2E1P51965 193 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 CDC42P60953 191 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 TMED1Q13445 227 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 BLMHQ13867 455 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 OLFML2AQ68BL7 652 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 NCR3LG1Q68D85 454 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 TRMT10AQ8TBZ6 339 aaKnown RBP18.83■□□□□ 0.6
COL9A3-213ENST00000489045 RFKQ969G6 155 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 NRIP2Q9BQI9 281 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 PLEKHA1Q9HB21 404 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 C19orf12Q9NSK7 152 aa18.83■□□□□ 0.6
COL9A3-213ENST00000489045 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL9A3-213ENST00000489045 MEIOCA2RUB1 952 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 H0YAE9 185 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 SLC1A7O00341 560 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 SYT7O43581 403 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 SULT1C4O75897 302 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 MPZP25189 248 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 PRDX2P32119 198 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 TAF9Q16594 264 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 ANGPTL5Q86XS5 388 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 CALHM1Q8IU99 346 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 ZNF561Q8N587 486 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 HES4Q9HCC6 221 aa18.82■□□□□ 0.6
COL9A3-213ENST00000489045 FAM230AA0A1W2PPH8 454 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 CLPSL1A2RUU4 121 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 ZNF85Q03923 595 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 SRSF4Q08170 494 aaKnown RBP18.81■□□□□ 0.6
COL9A3-213ENST00000489045 GDPGP1Q6ZNW5 385 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 C17orf107Q6ZR85 190 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 PRSS35Q8N3Z0 413 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 UBE2FQ969M7 185 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 IMPAD1Q9NX62 359 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 OR14J1Q9UGF5 321 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 GNG8Q9UK08 70 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 SLC7A11Q9UPY5 501 aa18.81■□□□□ 0.6
COL9A3-213ENST00000489045 EI24O14681 340 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms