RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FZD2Q14332 565 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 HNRNPA1L2Q32P51 320 aaKnown RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 HIKESHIQ53FT3 197 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 THEM4Q5T1C6 240 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 OR52M1Q8NGK5 317 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 FOXJ2Q9P0K8 574 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 NUP210Q8TEM1 1887 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 URB1O60287 2271 aaKnown RBP14.27□□□□□ -0.12
MCF2L-229ENST00000488765 A0A0A6YYD4 124 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 FAM24AA6NFZ4 105 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 ARPC3O15145 178 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 ZNF264O43296 627 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 CST7O76096 145 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 AGR2O95994 175 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 CEACAM8P31997 349 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-229ENST00000488765 MAS1LP35410 378 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 CLDN17P56750 224 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 ZIC1Q15915 447 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 ERASQ7Z444 233 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 ABHD6Q9BV23 337 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 PLA2G2FQ9BZM2 168 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 LPAR2Q9HBW0 351 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 MYOTQ9UBF9 498 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 RNF24Q9Y225 148 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 PAM16Q9Y3D7 125 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 RHBDD3Q9Y3P4 386 aa14.27□□□□□ -0.12
MCF2L-229ENST00000488765 GPR89AB7ZAQ6 455 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 SPINT1O43278 529 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 GPR89BP0CG08 455 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 FGF8P55075 233 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-229ENST00000488765 SNU13P55769 128 aaKnown RBP14.27□□□□□ -0.13
MCF2L-229ENST00000488765 ERVFC1-1P60608 527 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 H3F3AP84243 136 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 PHLDA2Q53GA4 152 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 C11orf42Q8N5U0 333 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 R3HDM4Q96D70 268 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 ADGRG7Q96K78 797 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 C5orf34Q96MH7 638 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 OR8B4Q96RC9 309 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 OR51B6Q9H340 312 aa14.27□□□□□ -0.13
MCF2L-229ENST00000488765 ELL3Q9HB65 397 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-229ENST00000488765 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-229ENST00000488765 DOCK11Q5JSL3 2073 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 CBY3A6NI87 242 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 CEACAM6P40199 344 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 RAB28P51157 221 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 SCAND1P57086 179 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 CLN3Q13286 438 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 ELAVL3Q14576 367 aaKnown RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 ERN2Q76MJ5 926 aaKnown RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 CDRT4Q8N9R6 151 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 GINS3Q9BRX5 216 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 C19orf53Q9UNZ5 99 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 FUT9Q9Y231 359 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 SPACA6W5XKT8 324 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 WDFY4Q6ZS81 3184 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 MYO7BQ6PIF6 2116 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 IGKV1D-42A0A075B6H8 117 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 CRTAPO75718 401 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 KAT7O95251 611 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 RENP00797 406 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 FAM189A2Q15884 450 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 VN1R4Q7Z5H5 301 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 ADAT3Q96EY9 351 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 GPHA2Q96T91 129 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 HDHD3Q9BSH5 251 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 HHLA2Q9UM44 414 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 PLXNA2O75051 1894 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 RRP8O43159 456 aaKnown RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 HSPA12AO43301 675 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 GPR137BO60478 399 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 H2BFMP0C1H6 154 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 LYL1P12980 280 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 RPS4Y1P22090 263 aaKnown RBP14.26□□□□□ -0.13
MCF2L-229ENST00000488765 HLA-DRB3P79483 266 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 IL15RAQ13261 267 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 RTP5Q14D33 572 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 GLIPR1L1Q6UWM5 242 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
MCF2L-229ENST00000488765 IFNA21P01568 189 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 SLC35G6P0C7Q6 338 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 ATP6V0CP27449 155 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 SSPNQ14714 243 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 DCAF10Q5QP82 559 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 METRNLQ641Q3 311 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 MYPOPQ86VE0 399 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-229ENST00000488765 OR10G6Q8NH81 332 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 URM1Q9BTM9 101 aaKnown RBP14.25□□□□□ -0.13
MCF2L-229ENST00000488765 PCBD2Q9H0N5 130 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 MSL2Q9HCI7 577 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 POLR3KQ9Y2Y1 108 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-229ENST00000488765 HEBP2Q9Y5Z4 205 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 IGKV1D-8A0A087WSZ0 117 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 A0A1W2PPQ1 181 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 DBHP09172 617 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 SEC11BP0C7V7 166 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 PEBP1P30086 187 aaKnown RBP14.25□□□□□ -0.13
MCF2L-229ENST00000488765 C1orf53Q5VUE5 145 aa14.25□□□□□ -0.13
MCF2L-229ENST00000488765 MEX3BQ6ZN04 569 aaKnown RBP14.25□□□□□ -0.13
MCF2L-229ENST00000488765 GPER1Q99527 375 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms