RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 INPP5EQ9NRR6 644 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 RPUSD1Q9UJJ7 312 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF222Q9UK12 451 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 SOX21Q9Y651 276 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 STAB1Q9NY15 2570 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 IGKV1-27A0A075B6S5 117 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF879B4DU55 563 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 E9PI62 339 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 J3QT63 122 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 SIGLEC5O15389 551 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ECDO95905 644 aaPredicted RBP13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 HTR1AP08908 422 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ACAA1P09110 424 aaPredicted RBP13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 PGA5P0DJD9 388 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 FPR2P25090 351 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ALKBH1Q13686 389 aaKnown RBP13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 KLHL22Q53GT1 634 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 TTC23Q5W5X9 447 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ACP7Q6ZNF0 438 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 C9orf139Q6ZV77 190 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ANGPTL5Q86XS5 388 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 OR10AC1Q8NH08 325 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 CYGBQ8WWM9 190 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ST8SIA4Q92187 359 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 TMIGD2Q96BF3 282 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF488Q96MN9 340 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 TBX15Q96SF7 602 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 NRIP2Q9BQI9 281 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 SIRPDQ9H106 197 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 ESM1Q9NQ30 184 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 RASL12Q9NYN1 266 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 MAB21L2Q9Y586 359 aa13.18□□□□□ -0.3
CTDSP1-209ENST00000488627 IGHV3OR16-10A0A075B7F0 116 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 IGKV1-9A0A0C4DH69 117 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 NDUFB3O43676 98 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 SFTPBP07988 381 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 GABPB1Q06547 395 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 IKZF1Q13422 519 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 BPIFB2Q8N4F0 458 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 DHRSXQ8N5I4 330 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 PNLDC1Q8NA58 520 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 MRPL48Q96GC5 212 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 MED30Q96HR3 178 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF48Q96MX3 618 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 WDFY2Q96P53 400 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 SUCNR1Q9BXA5 334 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 PKIBQ9C010 78 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 CNTD2Q9H8S5 307 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 PLEKHA1Q9HB21 404 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 HES4Q9HCC6 221 aa13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 NKX1-2Q9UD57 310 aaPredicted RBP13.17□□□□□ -0.3
CTDSP1-209ENST00000488627 TRAV40A0A0B4J280 105 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 GPR37O15354 613 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 GNAO1P09471 354 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 FUT6P51993 359 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 IL13RA1P78552 427 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 IL24Q13007 206 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 LRRC10Q5BKY1 277 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 LAIR2Q6ISS4 152 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 UTS2BQ765I0 119 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 CD177Q8N6Q3 437 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 SIGLECL1Q8N7X8 197 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 C8orf46Q8TAG6 207 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 TRMT10AQ8TBZ6 339 aaKnown RBP13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 NPRL2Q8WTW4 380 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 ZFAND2BQ8WV99 257 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 PP6455Q8WZ26 134 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 FGGYQ96C11 551 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 SDSLQ96GA7 329 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 DMRTB1Q96MA1 342 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 DCTN5Q9BTE1 182 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 HHLA2Q9UM44 414 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 SLC7A11Q9UPY5 501 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 POLDIP2Q9Y2S7 368 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
CTDSP1-209ENST00000488627 FAM230AA0A1W2PPH8 454 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 RFPL4AA6NLU0 287 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 RFPL4AL1F8VTS6 287 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 F8VVB4 439 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 F8VWA3 439 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 H0YAE9 185 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 GATBO75879 557 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 ZFPL1O95159 310 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 SERPINA3P01011 423 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 DCKP27707 260 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 ETV1P50549 477 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 CAV3P56539 151 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 ARF6P62330 175 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNRF1Q8ND25 227 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 DNAAF1Q8NEP3 725 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 FBLIM1Q8WUP2 373 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 PCGF1Q9BSM1 259 aa13.15□□□□□ -0.3
CTDSP1-209ENST00000488627 DCLRE1BQ9H816 532 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms