RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 MCUBQ9NWR8 336 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 NDRG2Q9UN36 371 aaKnown RBP0.72□□□□□ -2.29
SMC4-219ENST00000487747 MED13Q9UHV7 2174 aa0.72□□□□□ -2.29
SMC4-219ENST00000487747 TMEM131Q92545 1883 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 PLEKHG2Q9H7P9 1386 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 MROH5Q6ZUA9 1318 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 COL6A6A6NMZ7 2263 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 A0A1B0GU33 70 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 GMNCA6NCL1 334 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 GGTLC3B5MD39 225 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 TEX46H3BTG2 121 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 MPHOSPH10O00566 681 aaKnown RBP0.71□□□□□ -2.3
SMC4-219ENST00000487747 SYNGR2O43760 224 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 TTC4O95801 387 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 IGHMP01871 453 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 KRT16P08779 473 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 UBCP0CG48 685 aaKnown RBP0.71□□□□□ -2.3
SMC4-219ENST00000487747 ZNF708P17019 499 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 GNRHRP30968 328 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 BEX3Q00994 111 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 IL5RAQ01344 420 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 ADIGQ0VDE8 80 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 KLHL40Q2TBA0 621 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 EIF3MQ7L2H7 374 aaKnown RBP0.71□□□□□ -2.3
SMC4-219ENST00000487747 TMEM144Q7Z5S9 345 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 EIF4E3Q8N5X7 224 aaKnown RBP0.71□□□□□ -2.3
SMC4-219ENST00000487747 LINC00337Q8N6G1 96 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 ORAOV1Q8WV07 137 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 OTUB2Q96DC9 234 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 RNF170Q96K19 258 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 ZNF75AQ96N20 296 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 C20orf166-AS1Q96NR2 134 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 C11orf70Q9BRQ4 267 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 ARV1Q9H2C2 271 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 TMEM100Q9NV29 134 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 RAB20Q9NX57 234 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 TBC1D24Q9ULP9 559 aa0.71□□□□□ -2.3
SMC4-219ENST00000487747 ZNF443Q9Y2A4 671 aaPredicted RBP0.71□□□□□ -2.3
SMC4-219ENST00000487747 NPHP4O75161 1426 aaPredicted RBP0.71□□□□□ -2.3
SMC4-219ENST00000487747 DOCK10Q96BY6 2186 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 TRAV8-6A0A0B4J262 113 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 MYBPHLA2RUH7 354 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 LRRIQ4A6NIV6 560 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SLC22A20A6NK97 555 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 GOLGA8JA6NMD2 632 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SLC31A1O15431 190 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 PSCAO43653 123 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 MPDU1O75352 247 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 CDS2O95674 445 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 CTSGP08311 255 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SNRPAP09012 282 aaKnown RBP0.7□□□□□ -2.3
SMC4-219ENST00000487747 OR4Q2P0C623 313 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SEC11BP0C7V7 166 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 GOLGA8HP0CJ92 632 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 CD82P27701 267 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SLC6A1P30531 599 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 TUFMP49411 452 aaKnown RBP0.7□□□□□ -2.3
SMC4-219ENST00000487747 CLDN6P56747 220 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 ENDOGQ14249 297 aaKnown RBP0.7□□□□□ -2.3
SMC4-219ENST00000487747 LYPD6Q86Y78 171 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 OFCC1Q8IZS5 231 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SLC7A5P1Q8MH63 180 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 ZDHHC22Q8N966 263 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 Q8NAQ8 132 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 OR10Z1Q8NGY1 313 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 TNFRSF14Q92956 283 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 RBPMSQ93062 196 aaKnown RBP0.7□□□□□ -2.3
SMC4-219ENST00000487747 ISG20Q96AZ6 181 aaKnown RBP0.7□□□□□ -2.3
SMC4-219ENST00000487747 PPP1R36Q96LQ0 422 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 Q96MT0 163 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SPACA5Q96QH8 159 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 BPIFA3Q9BQP9 254 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 ABCB9Q9NP78 766 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 PRSS16Q9NQE7 514 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 NSD2O96028 1365 aa0.7□□□□□ -2.3
SMC4-219ENST00000487747 SETD1AO15047 1707 aaKnown RBP0.69□□□□□ -2.3
SMC4-219ENST00000487747 CR1P17927 2039 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 TRAV25A0A0B4J276 109 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 CTAGE15A4D2H0 777 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 C9JQL5 133 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 H3BN98 237 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 J3QT63 122 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 K7EPK0 472 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 SIVA1O15304 175 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 SMC2O95347 1197 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 CXorf1O96002 111 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 PTHLHP12272 177 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 HLA-GP17693 338 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 PAX6P26367 422 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 GPR1P46091 355 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 RPS5P46782 204 aaKnown RBP0.69□□□□□ -2.3
SMC4-219ENST00000487747 ATP6V0D1P61421 351 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 SLC35A1P78382 337 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 DNAJC3Q13217 504 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 DHRS2Q13268 280 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 RCN1Q15293 331 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 KCTD16Q68DU8 428 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 Q6ZQT7 251 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 CTAGE6Q86UF2 777 aa0.69□□□□□ -2.3
SMC4-219ENST00000487747 TMEM25Q86YD3 366 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms