RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 DCTN5Q9BTE1 182 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 SLC7A11Q9UPY5 501 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 POLDIP2Q9Y2S7 368 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 PCDHGB1Q9Y5G3 927 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 LOC100130705A0A1B0GUX0 176 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 LOC107986453A0A1B0GWG9 222 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 FAM230AA0A1W2PPH8 454 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 SLC16A6O15403 523 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 MPZL2O60487 215 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 UBCP0CG48 685 aaKnown RBP16.85■□□□□ 0.29
HDAC4-209ENST00000487617 GABRB1P18505 474 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 COMPP49747 757 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-209ENST00000487617 OR12D2P58182 307 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 SLC9A3R2Q15599 337 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 SMIM21Q3B7S5 101 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 ACP7Q6ZNF0 438 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 ENTHD1Q8IYW4 607 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 CMTM4Q8IZR5 234 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 RDH10Q8IZV5 341 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 OR2G2Q8NGZ5 317 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 NPRL2Q8WTW4 380 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 GATAD2BQ8WXI9 593 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 RNF166Q96A37 237 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-209ENST00000487617 SLC25A28Q96A46 364 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 LGALS12Q96DT0 336 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 DMRTB1Q96MA1 342 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 ZNF222Q9UK12 451 aa16.85■□□□□ 0.29
HDAC4-209ENST00000487617 EXOGQ9Y2C4 368 aaKnown RBP16.85■□□□□ 0.29
HDAC4-209ENST00000487617 IGHV1-69DA0A0B4J2H0 117 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 CLDN34H7C241 214 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 IGHV1-69P01742 117 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 PGA5P0DJD9 388 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 CAV3P56539 151 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 ZNF91Q05481 1191 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 VMO1Q7Z5L0 202 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 ANGPTL5Q86XS5 388 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 ZNRF1Q8ND25 227 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 TMEM185AQ8NFB2 350 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 RHOXF1Q8NHV9 184 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 C8orf46Q8TAG6 207 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 Q96MT0 163 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 FAM118AQ9NWS6 357 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 MAB21L2Q9Y586 359 aa16.84■□□□□ 0.29
HDAC4-209ENST00000487617 RFPL4AA6NLU0 287 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 RFPL4AL1F8VTS6 287 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 J3QLW9 94 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 NOS1APO75052 506 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-209ENST00000487617 GATBO75879 557 aaKnown RBP16.83■□□□□ 0.28
HDAC4-209ENST00000487617 NXPH2O95156 264 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 SERPINA3P01011 423 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 RNASE1P07998 156 aaKnown RBP16.83■□□□□ 0.28
HDAC4-209ENST00000487617 DBTP11182 482 aaKnown RBP16.83■□□□□ 0.28
HDAC4-209ENST00000487617 ZNF19P17023 458 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 CAPZA1P52907 286 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 UBE2V2Q15819 145 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 TMEM244Q5VVB8 128 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 PDZD9Q8IXQ8 264 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 BATF2Q8N1L9 274 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 KIR3DL3Q8N743 410 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 SDSLQ96GA7 329 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 MRPL48Q96GC5 212 aaKnown RBP16.83■□□□□ 0.28
HDAC4-209ENST00000487617 NRIP2Q9BQI9 281 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 CHST5Q9GZS9 411 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 ELL3Q9HB65 397 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-209ENST00000487617 FRRS1LQ9P0K9 344 aa16.83■□□□□ 0.28
HDAC4-209ENST00000487617 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-209ENST00000487617 A0A1W2PQ09 198 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 HOXA3O43365 443 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-209ENST00000487617 HTR1AP08908 422 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 MPZP25189 248 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 CFPP27918 469 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 ACTA2P62736 377 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 ACTG2P63267 376 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 ZSCAN26Q16670 478 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 FDX2Q6P4F2 183 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 CALHM1Q8IU99 346 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 CD177Q8N6Q3 437 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 C3orf56Q8N813 242 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 C10orf35Q96D05 121 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 C4orf36Q96KX1 117 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 PKIBQ9C010 78 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 PRDM13Q9H4Q3 707 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 AMBNQ9NP70 447 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 NOX4Q9NPH5 578 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 SIRT7Q9NRC8 400 aa16.82■□□□□ 0.28
HDAC4-209ENST00000487617 FADS2O95864 444 aaKnown RBP16.81■□□□□ 0.28
HDAC4-209ENST00000487617 HKR1P10072 659 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 PRDX2P32119 198 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 FUT6P51993 359 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 NANOS3P60323 173 aaKnown RBP16.81■□□□□ 0.28
HDAC4-209ENST00000487617 IL24Q13007 206 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 AWAT1Q58HT5 328 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 LHFPL3Q86UP9 236 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 ZNF555Q8NEP9 628 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 PP6455Q8WZ26 134 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 PELI1Q96FA3 418 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 MYCBPQ99417 103 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-209ENST00000487617 TNFRSF19Q9NS68 423 aa16.81■□□□□ 0.28
HDAC4-209ENST00000487617 SMPD3Q9NY59 655 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-209ENST00000487617 MYRFQ9Y2G1 1151 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms