RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TAS2R1Q9NYW7 299 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 A0A1W2PPH5 198 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 TCRBV4S1A1TA0A5B7 111 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 IGLV3-1P01715 115 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 TK1P04183 234 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 ALDOBP05062 364 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 H2BFMP0C1H6 154 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 GSTT1P30711 240 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 SMIM21Q3B7S5 101 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 NKAPLQ5M9Q1 402 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 LCN8Q6JVE9 175 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 OTOSQ8NHW6 89 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 ZNF671Q8TAW3 534 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 NRIP2Q9BQI9 281 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 CMC2Q9NRP2 79 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 VNN3Q9NY84 501 aa12.25□□□□□ -0.45
MCF2L-228ENST00000487354 OR5B21A6NL26 309 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 F2RL2O00254 374 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 SLC1A7O00341 560 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 SELENOFO60613 162 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 NOS1APO75052 506 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-228ENST00000487354 RBP4P02753 201 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 AMY1AP04745 511 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 AMY2AP04746 511 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 ARSJQ5FYB0 599 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-228ENST00000487354 SHFQ7M4L6 423 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 MRPL41Q8IXM3 137 aaKnown RBP12.24□□□□□ -0.45
MCF2L-228ENST00000487354 BATF2Q8N1L9 274 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 OR2T33Q8NG76 320 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 OR5A2Q8NGI9 324 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 OR13D1Q8NGV5 346 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 BAIAP2Q9UQB8 552 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 HILPDAQ9Y5L2 63 aa12.24□□□□□ -0.45
MCF2L-228ENST00000487354 hCG_1809904A0A1W2PP81 198 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 A0A1W2PPE2 198 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 A0A1W2PR64 198 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 A0A1W2PRV1 198 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 PRR32B1ATL7 298 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 E9PQ18 207 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 ARPC2O15144 300 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 ZNF737O75373 536 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 SASH3O75995 380 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 LYNP07948 512 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 ZNF728P0DKX0 622 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 PPP1R8Q12972 351 aaKnown RBP12.23□□□□□ -0.45
MCF2L-228ENST00000487354 IQCF1Q8N6M8 205 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 AQP11Q8NBQ7 271 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 HIST1H2AAQ96QV6 131 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 C1orf21Q9H246 121 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 FAM206AQ9NX38 181 aa12.23□□□□□ -0.45
MCF2L-228ENST00000487354 A0A0U1RQV5 110 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 SH2D7A6NKC9 451 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-228ENST00000487354 RIIAD1A6NNX1 92 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 J3QT63 122 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 K7N7A8 449 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 KRT36O76013 467 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 CCDC159P0C7I6 412 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 HSD17B1P14061 328 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 ZNF3P17036 446 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 AZGP1P25311 298 aaKnown RBP12.22□□□□□ -0.45
MCF2L-228ENST00000487354 MAP2K3P46734 347 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 ERVK11-1P61568 191 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 MOB3CQ70IA8 216 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 CENPVQ7Z7K6 275 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-228ENST00000487354 OR4P4Q8NGL7 312 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 MCUR1Q96AQ8 359 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 DGCR6LQ9BY27 220 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 MYLK2Q9H1R3 596 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 VIPAS39Q9H9C1 493 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 MAGEL2Q9UJ55 1249 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 U3KQK5 164 aa12.22□□□□□ -0.45
MCF2L-228ENST00000487354 IGHV2-26A0A0B4J1V2 119 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 PQLC2LA1A4F0 135 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 TNFRSF11BO00300 401 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 IFNGP01579 166 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 LPLP06858 475 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 CHRM2P08172 466 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 CD24P25063 80 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 MPZP25189 248 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 MAGEA2P43356 314 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 SLC34A1Q06495 639 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 PLCXD3Q63HM9 321 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 TMEM42Q69YG0 159 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 C18orf65Q6ZTR6 163 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 RNF144BQ7Z419 303 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 ZNF454Q8N9F8 522 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 FAM81AQ8TBF8 368 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 THEM6Q8WUY1 208 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 OR14J1Q9UGF5 321 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.45
MCF2L-228ENST00000487354 STARD9Q9P2P6 4700 aa12.21□□□□□ -0.46
MCF2L-228ENST00000487354 F8VVB4 439 aa12.2□□□□□ -0.46
MCF2L-228ENST00000487354 F8VWA3 439 aa12.2□□□□□ -0.46
MCF2L-228ENST00000487354 H0YHG0 523 aa12.2□□□□□ -0.46
MCF2L-228ENST00000487354 MMP23AO75900 390 aa12.2□□□□□ -0.46
MCF2L-228ENST00000487354 CCNB2O95067 398 aa12.2□□□□□ -0.46
MCF2L-228ENST00000487354 HAAOP46952 286 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms