RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DDA1Q9BW61 102 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 SPRY4Q9C004 299 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 OR2H1Q9GZK4 316 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 PLEKHJ1Q9NW61 149 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 ZNF391Q9UJN7 358 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 MCTS1Q9ULC4 181 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 CSAG2Q9Y5P2 127 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 ZNF292O60281 2723 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 FIGNL2A6NMB9 653 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 SERPINA5P05154 406 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 PATE4P0C8F1 98 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 PCBD1P61457 104 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 FOXO1Q12778 655 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 GALNT11Q8NCW6 608 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 EMG1Q92979 244 aaKnown RBP15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 ZNF75AQ96N20 296 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 WNT5BQ9H1J7 359 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 GPR35Q9HC97 309 aa15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 ZNF701Q9NV72 531 aaPredicted RBP15.65■□□□□ 0.1
PDLIM7-207ENST00000486828 IGKV1-27A0A075B6S5 117 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 FAM230AA0A1W2PPH8 454 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 RRP8O43159 456 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 ZNF806P0C7X5 589 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 FAM74A1Q5RGS3 127 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 MOB3CQ70IA8 216 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 RGCCQ9H4X1 137 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 FBXO9Q9UK97 447 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 BOKQ9UMX3 212 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 TEX46H3BTG2 121 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 ADAP1O75689 374 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 CSTBP04080 98 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 JMJD7P0C870 316 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 RPS2P15880 293 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 GLRA1P23415 457 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 RBP2P50120 134 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 NHLH1Q02575 133 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 RSU1Q15404 277 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 ANKRD55Q3KP44 614 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 NKAPLQ5M9Q1 402 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 PDSS1Q5T2R2 415 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 TMEM42Q69YG0 159 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 ASCL4Q6XD76 172 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 LHFPL2Q6ZUX7 228 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 ZNF100Q8IYN0 542 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 ABHD3Q8WU67 409 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 DCUN1D4Q92564 292 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 TMEM45BQ96B21 275 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 ZNF845Q96IR2 970 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 THOC3Q96J01 351 aaKnown RBP15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 RNF126Q9BV68 326 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 LRFN1Q9P244 771 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 WDFY3Q8IZQ1 3526 aa15.64■□□□□ 0.09
PDLIM7-207ENST00000486828 IGKV1D-8A0A087WSZ0 117 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 F5H0A9 414 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 SPRY1O43609 319 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 ANGPTL7O43827 346 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 F10P00742 488 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 ECI1P42126 302 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 SPEM2Q0P670 501 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 TUSC1Q2TAM9 212 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 CCDC157Q569K6 752 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 SPINK14Q6IE38 97 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 RPUSD3Q6P087 351 aaKnown RBP15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 SKA3Q8IX90 412 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 ZSCAN4Q8NAM6 433 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 FGFBP3Q8TAT2 258 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 BORCS8Q96FH0 119 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 PRR13Q9NZ81 148 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 GPR160Q9UJ42 338 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 HSF4Q9ULV5 492 aa15.63■□□□□ 0.09
PDLIM7-207ENST00000486828 TEX13DA0A0J9YY54 714 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 hCG_38984A0A1B0GV85 526 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 C9orf172C9J069 976 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 LINC01387J3KSC0 135 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 LGALS8O00214 317 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 NRASP01111 189 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 PGAM2P15259 253 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 DNTTIP1Q9H147 329 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 BARX1Q9HBU1 254 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 EDARQ9UNE0 448 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 C14orf166Q9Y224 244 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 GVINP1Q7Z2Y8 2422 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 TERTO14746 1132 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 PRSS12P56730 875 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 FAM3AP98173 230 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 SNTB1Q13884 538 aaKnown RBP15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 MYO7BQ6PIF6 2116 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 FAM173AQ9BQD7 235 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 HDHD3Q9BSH5 251 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 SPEF1Q9Y4P9 236 aa15.62■□□□□ 0.09
PDLIM7-207ENST00000486828 F8VVB4 439 aa15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 F8VWA3 439 aa15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 H0YIZ8 118 aa15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 MSTNO14793 375 aa15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 HOXD4P09016 255 aaPredicted RBP15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 LYL1P12980 280 aa15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 TAF9Q16594 264 aa15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 NRN1LQ496H8 165 aa15.61■□□□□ 0.09
PDLIM7-207ENST00000486828 PAN3Q58A45 887 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms