RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 ARL11Q969Q4 196 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 PNPLA2Q96AD5 504 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 GALMQ96C23 342 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 DCUN1D1Q96GG9 259 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 REEP6Q96HR9 211 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 TBX5Q99593 518 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 CDX2Q99626 313 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 GFI1Q99684 422 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 C20orf144Q9BQM9 153 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 LXNQ9BS40 222 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 URM1Q9BTM9 101 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 TMEM70Q9BUB7 260 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 TAPBPLQ9BX59 468 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 RSPO3Q9BXY4 272 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 MAP1LC3BQ9GZQ8 125 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 CHRNA10Q9GZZ6 450 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 SLC25A51Q9H1U9 297 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 C5orf66Q9H5L9 145 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 PHPT1Q9NRX4 125 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 ZNF224Q9NZL3 707 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 DUX4Q9UBX2 424 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 PILRAQ9UKJ1 303 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 WDR83OSQ9Y284 106 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 NSG2Q9Y328 171 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 EXOSC1Q9Y3B2 195 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 LOXL2Q9Y4K0 774 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 V9GYS6 101 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 ADAMTSL3P82987 1691 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 NCKAP5O14513 1909 aa3.54□□□□□ -1.84
R3HDM1-217ENST00000486532 MST1RQ04912 1400 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 MADDQ8WXG6 1647 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 MYH4Q9Y623 1939 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 A0A1B0GV50 99 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 PRSS51A0A1B0GVH4 220 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 CIB4A0PJX0 185 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 GLTPD2A6NH11 291 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 FAM159BA6NKW6 160 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 G3V4G9 280 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 SH2D1BO14796 132 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 RGS16O15492 202 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 STK16O75716 305 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 NDUFB4O95168 129 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 RENP00797 406 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ARG1P05089 322 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 CRYGDP07320 174 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 UBBP0CG47 229 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 SMIM18P0DKX4 95 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 CD37P11049 281 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 IGFBP3P17936 291 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ZBTB25P24278 435 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 GLP1RP43220 463 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 OR1E2P47887 323 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 RORCP51449 518 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 GNGT1P63211 74 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 PITX1P78337 314 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 CD47Q08722 323 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 TCP10Q12799 353 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 FAM53BQ14153 422 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 FASTKQ14296 549 aaKnown RBP3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ZNF234Q14588 700 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 RHEBQ15382 184 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 SHHQ15465 462 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 C3AR1Q16581 482 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 LRRC75BQ2VPJ9 315 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 TRMT12Q53H54 448 aaKnown RBP3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 AVPI1Q5T686 147 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 RSBN1Q5VWQ0 802 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 OR4A47Q6IF82 309 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 LCN10Q6JVE6 187 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 SCIMPQ6UWF3 145 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 UGT2A3Q6UWM9 527 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 CYS1Q717R9 158 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 SFTPA2Q8IWL1 248 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 VKORC1L1Q8N0U8 176 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 SLC35F6Q8N357 371 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 C9orf62Q8N4C0 152 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ZADH2Q8N4Q0 377 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 MS4A15Q8N5U1 240 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 TPRX1Q8N7U7 411 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 GATD1Q8NB37 220 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 DUSP18Q8NEJ0 188 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 BEST4Q8NFU0 473 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 OR5A1Q8NGJ0 315 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 OR9I1Q8NGQ6 314 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ACOT12Q8WYK0 555 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 TMEM159Q96B96 161 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ADTRPQ96IZ2 230 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 OR52E6Q96RD3 313 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 SUCNR1Q9BXA5 334 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 CHIAQ9BZP6 476 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 Q9H521 79 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 RETNQ9HD89 108 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 FGF20Q9NP95 211 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ACOT13Q9NPJ3 140 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 CISHQ9NSE2 258 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 STARD5Q9NSY2 213 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 RNF186Q9NXI6 227 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 ZNF319Q9P2F9 582 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 GALPQ9UBC7 116 aa3.53□□□□□ -1.84
R3HDM1-217ENST00000486532 DHCR7Q9UBM7 475 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms