RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 C3orf56Q8N813 242 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 POC1AQ8NBT0 407 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF555Q8NEP9 628 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 ANGPTL6Q8NI99 470 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 UBE2FQ969M7 185 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 Q96MT0 163 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 CNTD2Q9H8S5 307 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 RASL12Q9NYN1 266 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 IGHV1-69DA0A0B4J2H0 117 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 SLC16A6O15403 523 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 SYNGR1O43759 233 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 FCN3O75636 299 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 SERPINA3P01011 423 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 IGHV1-69P01742 117 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 RNASE1P07998 156 aaKnown RBP10.64□□□□□ -0.71
CHMP3-208ENST00000486404 HTR1AP08908 422 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 OCM2P0CE71 109 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 OCMP0CE72 109 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-208ENST00000486404 PGA5P0DJD9 388 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 ZNF20P17024 532 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 TGM4P49221 684 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 BLMHQ13867 455 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 DGUOKQ16854 277 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 DEFB112Q30KQ8 113 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 ACP7Q6ZNF0 438 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 PDZD9Q8IXQ8 264 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 BATF2Q8N1L9 274 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 ACBD7Q8N6N7 88 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 ZNF488Q96MN9 340 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 DCTN5Q9BTE1 182 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 CHST5Q9GZS9 411 aa10.64□□□□□ -0.71
CHMP3-208ENST00000486404 IGKV1D-17A0A075B6S4 117 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 CENPVL3A0A0U1RRI6 287 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 TMEM89A2RUT3 159 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 CLDN34H7C241 214 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 HOXA3O43365 443 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-208ENST00000486404 FADS2O95864 444 aaKnown RBP10.63□□□□□ -0.71
CHMP3-208ENST00000486404 ACAA1P09110 424 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-208ENST00000486404 DBTP11182 482 aaKnown RBP10.63□□□□□ -0.71
CHMP3-208ENST00000486404 PSG2P11465 335 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 KIR3DL2P43630 455 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 CAV3P56539 151 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 GUCA2AQ02747 115 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 SLC9A3R2Q15599 337 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 KCTD20Q7Z5Y7 419 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 ENTHD1Q8IYW4 607 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 FAM185AQ8N0U4 392 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 PRSS35Q8N3Z0 413 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 PP6455Q8WZ26 134 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 LGALS12Q96DT0 336 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 BORCS8Q96FH0 119 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 C4orf36Q96KX1 117 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 PKIBQ9C010 78 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 ELL3Q9HB65 397 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-208ENST00000486404 NOX4Q9NPH5 578 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 SIRT7Q9NRC8 400 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 TNFRSF19Q9NS68 423 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 SMPD3Q9NY59 655 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-208ENST00000486404 OR14J1Q9UGF5 321 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 ZNF222Q9UK12 451 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 SOX21Q9Y651 276 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-208ENST00000486404 ANK2Q01484 3957 aa10.63□□□□□ -0.71
CHMP3-208ENST00000486404 TRBV23-1A0A0A0MS06 115 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 LOC100130705A0A1B0GUX0 176 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 J3QLW9 94 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 CYB5AP00167 134 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 ZNF19P17023 458 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 AMY2BP19961 511 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 EEF1B2P24534 225 aaKnown RBP10.62□□□□□ -0.71
CHMP3-208ENST00000486404 COMPP49747 757 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-208ENST00000486404 OR12D2P58182 307 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 ISL1P61371 349 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 FOXL1Q12952 345 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 IL24Q13007 206 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 AWAT1Q58HT5 328 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 TMEM244Q5VVB8 128 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 NCR3LG1Q68D85 454 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 FIP1L1Q6UN15 594 aaKnown RBP10.62□□□□□ -0.71
CHMP3-208ENST00000486404 Q6ZSR3 168 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 ZNF676Q8N7Q3 588 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 ZNRF1Q8ND25 227 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 LY6G5BQ8NDX9 201 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 OR13C3Q8NGS6 347 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 OR2G2Q8NGZ5 317 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 C8orf46Q8TAG6 207 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 C10orf35Q96D05 121 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 SDSLQ96GA7 329 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 DMRTB1Q96MA1 342 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 C1orf147Q96MC9 270 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-208ENST00000486404 SLC29A1Q99808 456 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 NRIP2Q9BQI9 281 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 ALG8Q9BVK2 526 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 AASSQ9UDR5 926 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 CAB39Q9Y376 341 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-208ENST00000486404 FAM96BQ9Y3D0 163 aa10.62□□□□□ -0.71
CHMP3-208ENST00000486404 TENM1Q9UKZ4 2725 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 A0A1W2PPH5 198 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 RFPL4AA6NLU0 287 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 RFPL4AL1F8VTS6 287 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms