RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 MPC2O95563 127 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 CD37P11049 281 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 HRH1P35367 487 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 RPL23AP62750 156 aaKnown RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 TLE4Q04727 773 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 RGS7BPQ6MZT1 257 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 GCNT2Q8N0V5 402 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 C15orf54Q8N8G6 183 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 SLC38A9Q8NBW4 561 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 TINAGL1Q9GZM7 467 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 TMEM74BQ9NUR3 256 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 OGG1O15527 345 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 NAT2P11245 290 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 TMPRSS7Q7RTY8 843 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 MRGPREQ86SM8 312 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 COMMD1Q8N668 190 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 OR5M8Q8NGP6 311 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 OPA3Q9H6K4 179 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 WDR54Q9H977 334 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 SF3B6Q9Y3B4 125 aaKnown RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 FBXO7Q9Y3I1 522 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 SPINT2O43291 252 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 TGOLN2O43493 480 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ENSAO43768 121 aaKnown RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 RPS2P15880 293 aaKnown RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF32P17041 273 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 FCGR2CP31995 323 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 DCAF10Q5QP82 559 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ZDHHC22Q8N966 263 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 SCCPDHQ8NBX0 429 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ZPLD1Q8TCW7 415 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 PP6455Q8WZ26 134 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 C2orf50Q96LR7 162 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 RAB33BQ9H082 229 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 PARP12Q9H0J9 701 aaKnown RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 RNF212BA8MTL3 300 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF354AO60765 605 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 IGF2P01344 180 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 BGLAPP02818 100 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 HLA-DOBP13765 273 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 RPL12P30050 165 aaKnown RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 HAAOP46952 286 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 AGFG1P52594 562 aaKnown RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 SPATA46Q5T0L3 261 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF774Q6NX45 483 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 LHFPL2Q6ZUX7 228 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 DEFB108BQ8NET1 73 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 OR2AE1Q8NHA4 323 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ASB10Q8WXI3 467 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF2Q9BSG1 426 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-228ENST00000486227 RASL12Q9NYN1 266 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 SPRY1O43609 319 aaPredicted RBP9.77□□□□□ -0.84
HDAC6-228ENST00000486227 NHLRC3Q5JS37 347 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 OR4S1Q8NGB4 309 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 KIRREL1Q96J84 757 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 AKR1E2Q96JD6 320 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF75AQ96N20 296 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 PLEKHA2Q9HB19 425 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 CA10Q9NS85 328 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 UQCC1Q9NVA1 299 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 FRRS1LQ9P0K9 344 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 SLCO1B1Q9Y6L6 691 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 URGCP-MRPS24S4R325 110 aa9.77□□□□□ -0.84
HDAC6-228ENST00000486227 SLC23A3Q6PIS1 610 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF808Q8N4W9 903 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-228ENST00000486227 SUMF1Q8NBK3 374 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 OR6X1Q8NH79 312 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 MARCH1Q8TCQ1 289 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 SAP25Q8TEE9 199 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 FBXO17Q96EF6 278 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 AICDAQ9GZX7 198 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 ST3GAL6Q9Y274 331 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 GPR137BO60478 399 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 LINC00271P0C7V0 271 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 CRYBA2P53672 197 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 RAC3P60763 192 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
HDAC6-228ENST00000486227 MSMO1Q15800 293 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 SEZ6L2Q6UXD5 910 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 OR56B2PQ8NGI1 322 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 OR4D6Q8NGJ1 314 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 SGK3Q96BR1 496 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 CTHRC1Q96CG8 243 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 CEBPZOSA8MTT3 80 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 MSTNO14793 375 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 TUSC2O75896 110 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 TBX6O95947 436 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-228ENST00000486227 CELA2AP08217 269 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 THBS4P35443 961 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 PRSS12P56730 875 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 SRPXP78539 464 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 BATFQ16520 125 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 TFAP2EQ6VUC0 442 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 CDC20BQ86Y33 519 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 FBXL14Q8N1E6 418 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 FRZBQ92765 325 aa9.77□□□□□ -0.85
HDAC6-228ENST00000486227 ICE1Q9Y2F5 2266 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF816-ZNF321PA0A0X1KG74 233 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 KIR2DS1A0A191URI9 304 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms