RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 TGFAP01135 160 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 CD37P11049 281 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 ADRA2CP18825 462 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 OR10A3P58181 314 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 ERVS71-1P61550 626 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 CNN3Q15417 329 aaKnown RBP14.41□□□□□ -0.1
VIM-205ENST00000485947 TMEM42Q69YG0 159 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 NR2C2APQ86WQ0 139 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 OR56B2PQ8NGI1 322 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 SLC25A40Q8TBP6 338 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 GFI1Q99684 422 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 OR2J1Q9GZK6 312 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 OR51B6Q9H340 312 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 DECR2Q9NUI1 292 aa14.41□□□□□ -0.1
VIM-205ENST00000485947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.41□□□□□ -0.13e-7■■■■■ 39.6
VIM-205ENST00000485947 SMIM30A4D0T7 59 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 IFITM5A6NNB3 132 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 CD300LBA8K4G0 201 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 B4DSR2 109 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 AIPO00170 330 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 MAGEB3O15480 346 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 RP2O75695 350 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 NCR1O76036 304 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 CST4P01036 141 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 ATF1P18846 271 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 COL8A2P25067 703 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 ZNF81P51508 661 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 CAV3P56539 151 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 HLXQ14774 488 aaPredicted RBP14.4□□□□□ -0.1
VIM-205ENST00000485947 MZT2AQ6P582 158 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 OR5AS1Q8N127 324 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 OR51A2Q8NGJ7 313 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 SPSB1Q96BD6 273 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 HAVCR1Q96D42 359 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 TSC22D3Q99576 134 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 SLC30A2Q9BRI3 323 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 EGLN1Q9GZT9 426 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 ABCB9Q9NP78 766 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 ABRACLQ9P1F3 81 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 PEX16Q9Y5Y5 336 aa14.4□□□□□ -0.1
VIM-205ENST00000485947 LRP5LA4QPB2 252 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 A6NIN4 97 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 IQCF6A8MYZ5 107 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 NRASP01111 189 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 OCMP0CE72 109 aaPredicted RBP14.39□□□□□ -0.11
VIM-205ENST00000485947 PRKACBP22694 351 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 MMP15P51511 669 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 DVL1P1P54792 670 aaPredicted RBP14.39□□□□□ -0.11
VIM-205ENST00000485947 SCAND1P57086 179 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 CMBLQ96DG6 245 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 ELMOD3Q96FG2 381 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 CPNE2Q96FN4 548 aaPredicted RBP14.39□□□□□ -0.11
VIM-205ENST00000485947 UQCC2Q9BRT2 126 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 METTL17Q9H7H0 456 aaPredicted RBP14.39□□□□□ -0.11
VIM-205ENST00000485947 SAP30LQ9HAJ7 183 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 SMURF1Q9HCE7 757 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 DAPK2Q9UIK4 370 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 MPC1Q9Y5U8 109 aa14.39□□□□□ -0.11
VIM-205ENST00000485947 IGHV1-69-2A0A0G2JMI3 117 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 ANKRD30BLA7E2S9 258 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 LYNX1G3V0Z9 82 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 SLC17A2O00624 439 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 GMDSO60547 372 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 CD55P08174 381 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 LYNX1P0DP58 116 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 KITLGP21583 273 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 AZGP1P25311 298 aaKnown RBP14.38□□□□□ -0.11
VIM-205ENST00000485947 CAPZA1P52907 286 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 CCL8P80075 99 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 LSAMPQ13449 338 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 UBE2V2Q15819 145 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 HFEQ30201 348 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 C1orf100Q5SVJ3 147 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 FAM120AOSQ5T036 256 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 SPATA46Q5T0L3 261 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 IDNKQ5T6J7 187 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 DDI2Q5TDH0 399 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 LYPD6Q86Y78 171 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 DNAAF1Q8NEP3 725 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 OR6M1Q8NGM8 313 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 TBC1D15Q8TC07 691 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 YIPF5Q969M3 257 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 TIMD4Q96H15 378 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 C6orf62Q9GZU0 229 aaPredicted RBP14.38□□□□□ -0.11
VIM-205ENST00000485947 PLGRKTQ9HBL7 147 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 MRPL15Q9P015 296 aaKnown RBP14.38□□□□□ -0.11
VIM-205ENST00000485947 STEAP1Q9UHE8 339 aa14.38□□□□□ -0.11
VIM-205ENST00000485947 IGKV1-9A0A0C4DH69 117 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 PPIHO43447 177 aaKnown RBP14.37□□□□□ -0.11
VIM-205ENST00000485947 HCKP08631 526 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 CALCBP10092 127 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 SRD5A1P18405 259 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 S100A5P33763 92 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 OR2T2Q6IF00 324 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 LHFPL2Q6ZUX7 228 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 TEX29Q8N6K0 151 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 OR6Q1Q8NGQ2 317 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 PIGCQ92535 297 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 PAPOLGQ9BWT3 736 aaKnown RBP14.37□□□□□ -0.11
VIM-205ENST00000485947 GPR173Q9NS66 373 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms