RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 KLF2Q9Y5W3 355 aaPredicted RBP9.67□□□□□ -0.86
SND1-212ENST00000485871 NUBP2Q9Y5Y2 271 aa9.67□□□□□ -0.86
SND1-212ENST00000485871 CHD3Q12873 2000 aaKnown RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 LOC100289279A0A1B0GTE1 492 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 XRCC3O43542 346 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 SSX4O60224 188 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 PLAUP00749 431 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 NRASP01111 189 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 IGHV3-13P01766 116 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 RAB3AP20336 220 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 FAUP35544 74 aaKnown RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 PRDX4Q13162 271 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 GPR176Q14439 515 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 FAM189A2Q15884 450 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 ZNF718Q3SXZ3 478 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 DMRTC1Q5HYR2 192 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 ADAM5Q6NVV9 412 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 Q6ZR03 302 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 ZBTB8BQ8NAP8 495 aaPredicted RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 MRPL24Q96A35 216 aaKnown RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 NKX3-1Q99801 234 aaPredicted RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 CA10Q9NS85 328 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 MRPL15Q9P015 296 aaKnown RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 MYEF2Q9P2K5 600 aaKnown RBP9.66□□□□□ -0.86
SND1-212ENST00000485871 GPR160Q9UJ42 338 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 FZR1Q9UM11 496 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 SPEF1Q9Y4P9 236 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 PLCE1Q9P212 2302 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 ITPR3Q14573 2671 aa9.66□□□□□ -0.86
SND1-212ENST00000485871 IGKV1-27A0A075B6S5 117 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 ZNF850A8MQ14 1090 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 E7EQL1 145 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 INMT-MINDY4F8WBC2 141 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 SULT1C2O00338 296 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 CD3EP07766 207 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 SELEP16581 610 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 RAB6AP20340 208 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 FABP6P51161 128 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 ZP1P60852 638 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 RPS23P62266 143 aaKnown RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 PLA1AQ53H76 456 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 BHLHE23Q8NDY6 225 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 OR8G5Q8NG78 346 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 FAM222BQ8WU58 562 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 PIGCQ92535 297 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 SLC25A28Q96A46 364 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 MARVELD3Q96A59 401 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 SPSB1Q96BD6 273 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 FAM3DQ96BQ1 224 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 RADILQ96JH8 1075 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 TECTBQ96PL2 329 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 SORCS2Q96PQ0 1159 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 UQCC2Q9BRT2 126 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 TRAF4Q9BUZ4 470 aaPredicted RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 PAPOLGQ9BWT3 736 aaKnown RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 MRPL37Q9BZE1 423 aaKnown RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 MMP28Q9H239 520 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 METTL17Q9H7H0 456 aaPredicted RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 NLKQ9UBE8 527 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 CGGBP1Q9UFW8 167 aaPredicted RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 ITGB1BP2Q9UKP3 347 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 MRPS7Q9Y2R9 242 aaKnown RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 RBMX2Q9Y388 322 aaKnown RBP9.65□□□□□ -0.86
SND1-212ENST00000485871 RNF115Q9Y4L5 304 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 MPC1Q9Y5U8 109 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 ARFGEF3Q5TH69 2177 aa9.65□□□□□ -0.86
SND1-212ENST00000485871 A0A0B4J203 849 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 PQLC2LA1A4F0 135 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 ANKRD30BLA7E2S9 258 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 MLNRO43193 412 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 PRAF2O60831 178 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 CDK2P24941 298 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 HTR2CP28335 458 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 GCH1P30793 250 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 GDNFP39905 211 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 DGCR2P98153 550 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 KLF9Q13886 244 aaPredicted RBP9.64□□□□□ -0.87
SND1-212ENST00000485871 DAZAP2Q15038 168 aaPredicted RBP9.64□□□□□ -0.87
SND1-212ENST00000485871 CNN3Q15417 329 aaKnown RBP9.64□□□□□ -0.87
SND1-212ENST00000485871 ADIPOQQ15848 244 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 TATDN3Q17R31 274 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 RAB12Q6IQ22 244 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 VHLLQ6RSH7 139 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 SLC22A25Q6T423 547 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 DNM1P46Q6ZS02 220 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 MOB3CQ70IA8 216 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 WDR86Q86TI4 376 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 ZDHHC23Q8IYP9 409 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 OR4D6Q8NGJ1 314 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 OR6F1Q8NGZ6 308 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 OR5P3Q8WZ94 311 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 NEUROG1Q92886 237 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 DVL3Q92997 716 aaPredicted RBP9.64□□□□□ -0.87
SND1-212ENST00000485871 C1orf147Q96MC9 270 aaPredicted RBP9.64□□□□□ -0.87
SND1-212ENST00000485871 SPACA5Q96QH8 159 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 CNTD2Q9H8S5 307 aa9.64□□□□□ -0.87
SND1-212ENST00000485871 ZNF107Q9UII5 783 aaPredicted RBP9.64□□□□□ -0.87
SND1-212ENST00000485871 PAIP2BQ9ULR5 123 aaKnown RBP9.64□□□□□ -0.87
SND1-212ENST00000485871 ATP23Q9Y6H3 246 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms