RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PPIAL4GP0DN37 164 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 MYL12AP19105 171 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 CAPGP40121 348 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 CCR9P51686 369 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 ATP1B3P54709 279 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 ARF6P62330 175 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 IL18R1Q13478 541 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 UBE2V2Q15819 145 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 SMIM21Q3B7S5 101 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 KRTAP24-1Q3LI83 254 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 ATPAF1Q5TC12 328 aaPredicted RBP10.38□□□□□ -0.75
PTCD1-205ENST00000485746 OGFRL1Q5TC84 451 aaPredicted RBP10.38□□□□□ -0.75
PTCD1-205ENST00000485746 GPR157Q5UAW9 335 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 FDX2Q6P4F2 183 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 ANGPTL5Q86XS5 388 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 CMTM4Q8IZR5 234 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 C8orf59Q8N0T1 100 aaPredicted RBP10.38□□□□□ -0.75
PTCD1-205ENST00000485746 BATF2Q8N1L9 274 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 POC1AQ8NBT0 407 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 TMEM185AQ8NFB2 350 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 PP6455Q8WZ26 134 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 ZNF488Q96MN9 340 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 CHST5Q9GZS9 411 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 MRPS18AQ9NVS2 196 aaKnown RBP10.38□□□□□ -0.75
PTCD1-205ENST00000485746 SLC25A10Q9UBX3 287 aaPredicted RBP10.38□□□□□ -0.75
PTCD1-205ENST00000485746 ZNF69Q9UC07 566 aa10.38□□□□□ -0.75
PTCD1-205ENST00000485746 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 TRBV2A0A0J9YWF9 115 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 A0A1B0GW55 424 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 RFPL4AA6NLU0 287 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 RFPL4AL1F8VTS6 287 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 H0YHG0 523 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 TRIM77I1YAP6 450 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 WBP4O75554 376 aaKnown RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 VENTXO95231 258 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 TFF1P04155 84 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ISG15P05161 165 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ACAA1P09110 424 aaPredicted RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4L2P0CJ85 424 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4L3P0CJ86 424 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4L4P0CJ87 422 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4L5P0CJ88 424 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4L6P0CJ89 424 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4L7P0CJ90 424 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 PSG2P11465 335 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ATF1P18846 271 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 PRKACBP22694 351 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DCKP27707 260 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 TGM4P49221 684 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 RBP2P50120 134 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 NANOS3P60323 173 aaKnown RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ADARB1P78563 741 aaKnown RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 SLC34A1Q06495 639 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 C11orf91Q3C1V1 193 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4L9Q6RFH8 374 aaPredicted RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ACP7Q6ZNF0 438 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ZNF788Q6ZQV5 615 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 USP43Q70EL4 1123 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 EGFL6Q8IUX8 553 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 PHC2Q8IXK0 858 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 SIGLECL1Q8N7X8 197 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 OR5AK2Q8NH90 309 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ANGPTL6Q8NI99 470 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 HAVCR2Q8TDQ0 301 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 TSEN15Q8WW01 171 aaKnown RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 UPRTQ96BW1 309 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 ADAT3Q96EY9 351 aaPredicted RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 GAFA1Q96PS6 74 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 PKIBQ9C010 78 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 FGF20Q9NP95 211 aaPredicted RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 DUX4Q9UBX2 424 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 OR14J1Q9UGF5 321 aa10.37□□□□□ -0.75
PTCD1-205ENST00000485746 RPUSD1Q9UJJ7 312 aaKnown RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 EXOSC1Q9Y3B2 195 aaKnown RBP10.37□□□□□ -0.75
PTCD1-205ENST00000485746 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■■■□□ 16.8
PTCD1-205ENST00000485746 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 A0A1W2PQ09 198 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 TMEM212A6NML5 194 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 OR4C45A6NMZ5 311 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 H0YAE9 185 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 SLC1A7O00341 560 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 CASQ2O14958 399 aaPredicted RBP10.36□□□□□ -0.75
PTCD1-205ENST00000485746 SIGLEC5O15389 551 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 FSHBP01225 129 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 PGA5P0DJD9 388 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 IGHV4-38-2P0DP08 117 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 SELLP14151 372 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 PRDX2P32119 198 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 POU3F4P49335 361 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 MTCP1P56278 107 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 PDCD1Q15116 288 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
PTCD1-205ENST00000485746 LHFPL2Q6ZUX7 228 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 CALHM1Q8IU99 346 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 MKXQ8IYA7 352 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 BCL6BQ8N143 479 aaPredicted RBP10.36□□□□□ -0.75
PTCD1-205ENST00000485746 FGFRL1Q8N441 504 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 SPATA3Q8NHX4 192 aa10.36□□□□□ -0.75
PTCD1-205ENST00000485746 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms