RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 PAX2Q02962 417 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DCAF12L2Q5VW00 463 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 WDR25Q64LD2 544 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 STUMQ69YW2 141 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4L9Q6RFH8 374 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 C1orf229Q6ZS94 237 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZFP41Q8N8Y5 198 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR4M2Q8NGB6 313 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR5T2Q8NGG2 359 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 C12orf43Q96C57 262 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZNF488Q96MN9 340 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 TECTBQ96PL2 329 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 CCL13Q99616 98 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 TMPRSS13Q9BYE2 586 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 KAAG1Q9UBP8 84 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DNAJB11Q9UBS4 358 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4Q9UBX2 424 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 CLN8Q9UBY8 286 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 MYL12BO14950 172 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 PGA5P0DJD9 388 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 ATF1P18846 271 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 HNF1AP20823 631 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 GLRA1P23415 457 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 AZGP1P25311 298 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 FUT6P51993 359 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 SLC35A2P78381 396 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 CNN3Q15417 329 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 DMKNQ6E0U4 476 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 BATF2Q8N1L9 274 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 FGFRL1Q8N441 504 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR13C9Q8NGT0 318 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZNF671Q8TAW3 534 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 TSEN15Q8WW01 171 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 DACT3Q96B18 629 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 BORCS8Q96FH0 119 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 CNBD2Q96M20 576 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 PKIBQ9C010 78 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 RASSF4Q9H2L5 321 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 NLKQ9UBE8 527 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR5V1Q9UGF6 321 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 OPN4Q9UHM6 478 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 DHDHQ9UQ10 334 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 POLDIP2Q9Y2S7 368 aa11.29□□□□□ -0.6
SOX2-OT-209ENST00000485035 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 C22orf46C9J442 243 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 J3QLI3 93 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 TMPRSS2O15393 492 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 NOS1APO75052 506 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 PLATP00750 562 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 FAM157CP0CG43 387 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 SELLP14151 372 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 SRD5A1P18405 259 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 GATA3P23771 443 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 SOX2P48431 317 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 WNT4P56705 351 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 IL24Q13007 206 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 RNLSQ5VYX0 342 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 ASPHD2Q6ICH7 369 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 ACP7Q6ZNF0 438 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 PARP16Q8N5Y8 322 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 DNAAF1Q8NEP3 725 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR13C5Q8NGS8 318 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 ANGPTL6Q8NI99 470 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 GPR148Q8TDV2 347 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 MYDGFQ969H8 173 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 TMIGD2Q96BF3 282 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 PGLYRP3Q96LB9 341 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 CDCA4Q9BXL8 241 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZCCHC4Q9H5U6 513 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 SCN3BQ9NY72 215 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 ERGIC3Q9Y282 383 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZNF281Q9Y2X9 895 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
SOX2-OT-209ENST00000485035 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.6
SOX2-OT-209ENST00000485035 IGKV1D-17A0A075B6S4 117 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 LOC105371242A0A075B767 164 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 PNMA8CA0A1B0GUJ8 204 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 OR2AT4A6NND4 320 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 DVL1O14640 695 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 MT-ND2P03891 347 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 PSG2P11465 335 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 PRKACBP22694 351 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 CRHBPP24387 322 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 RBP2P50120 134 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 NPY4RP50391 375 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 TAS2R43P59537 309 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 ERVK11-1P61568 191 aa11.27□□□□□ -0.61
SOX2-OT-209ENST00000485035 IRF3Q14653 427 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms