RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 MS4A8Q9BY19 250 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 CHRNA10Q9GZZ6 450 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 ARV1Q9H2C2 271 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 CRLF2Q9HC73 371 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 HEBP1Q9NRV9 189 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 TMEM100Q9NV29 134 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 DDX18Q9NVP1 670 aaKnown RBP0.85□□□□□ -2.27
VPS50-216ENST00000484954 MRPL22Q9NWU5 206 aaKnown RBP0.85□□□□□ -2.27
VPS50-216ENST00000484954 CAB39Q9Y376 341 aaPredicted RBP0.85□□□□□ -2.27
VPS50-216ENST00000484954 PPIL1Q9Y3C6 166 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 SLC22A7Q9Y694 548 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 VWA8A3KMH1 1905 aa0.85□□□□□ -2.27
VPS50-216ENST00000484954 TMEM72A0PK05 275 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 NCF1BA6NI72 391 aaPredicted RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 NCF1CA8MVU1 366 aaPredicted RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 ZNF73O43830 326 aaPredicted RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 SMC2O95347 1197 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 LCA5LO95447 670 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 IGHV1-46P01743 117 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 PMCHP20382 165 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 PAX6P26367 422 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 PRSS3P35030 304 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 APLNRP35414 380 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 AP1S2P56377 157 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 TAS2R39P59534 338 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 PAFAH1B2P68402 229 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 FMODQ06828 376 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 NAB1Q13506 487 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 HADHQ16836 314 aaKnown RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 PDZD11Q5EBL8 140 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 LDLRAD2Q5SZI1 272 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 TPRG1LQ5T0D9 272 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 MRPL21Q7Z2W9 205 aaKnown RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 TMCO2Q7Z6W1 182 aaPredicted RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 C20orf144Q9BQM9 153 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 TMEM175Q9BSA9 504 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 VSIRQ9H7M9 311 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 INIPQ9NRY2 104 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 TMEM106BQ9NUM4 274 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 RABL2AQ9UBK7 228 aaPredicted RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 PEF1Q9UBV8 284 aaKnown RBP0.84□□□□□ -2.27
VPS50-216ENST00000484954 CES1P1Q9UKY3 287 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 PSME2Q9UL46 239 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 ZNF337Q9Y3M9 751 aa0.84□□□□□ -2.27
VPS50-216ENST00000484954 MYO9BQ13459 2157 aa0.84□□□□□ -2.28
VPS50-216ENST00000484954 C2orf16Q68DN1 1984 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 LOC102724200A0A096LPH7 203 aaPredicted RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 TTC4O95801 387 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 TPM2P07951 284 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 CTSGP08311 255 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 SRMP19623 302 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 CSRP1P21291 193 aaKnown RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 CPN2P22792 545 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 GNRHRP30968 328 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 PCK1P35558 622 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 HCCSP53701 268 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 MLF1P58340 268 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 GRB2P62993 217 aaKnown RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 RPL18AQ02543 176 aaKnown RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 C2orf54Q08AI8 447 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 MFSD14CQ5VZR4 134 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 C16orf87Q6PH81 154 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 EPGNQ6UW88 154 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 OTUD6AQ7L8S5 288 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 PRNTQ86SH4 94 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 CYB561A3Q8NBI2 242 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 BBOF1Q8ND07 529 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 OR4M2Q8NGB6 313 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 ZNF420Q8TAQ5 688 aaPredicted RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 SFXN5Q8TD22 340 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 PIH1D2Q8WWB5 315 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 TFGQ92734 400 aaPredicted RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 ALS2CR12Q96Q35 445 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 CHID1Q9BWS9 393 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 IL22Q9GZX6 179 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 STMN4Q9H169 189 aaPredicted RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 NCOR1P1Q9H4R4 102 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 FANCEQ9HB96 536 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 FAM60AQ9NP50 221 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 OR2S2Q9NQN1 319 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 DDIT4Q9NX09 232 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 RAB22AQ9UL26 194 aa0.83□□□□□ -2.28
VPS50-216ENST00000484954 NDRG2Q9UN36 371 aaKnown RBP0.83□□□□□ -2.28
VPS50-216ENST00000484954 TRAV8-6A0A0B4J262 113 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 IZUMO1RA6ND01 250 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 HACD1B0YJ81 288 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 J3QT63 122 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 DFFAO00273 331 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 UPK1AO00322 258 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 HSBP1O75506 76 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 SNAI1O95863 264 aaPredicted RBP0.82□□□□□ -2.28
VPS50-216ENST00000484954 IGHMP01871 453 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 OR5AC1P0C628 307 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 RALBP11234 206 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 PRPS1L1P21108 318 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 TEAD1P28347 426 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 CCT6AP40227 531 aaKnown RBP0.82□□□□□ -2.28
VPS50-216ENST00000484954 CSKP41240 450 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 PPP1CAP62136 330 aa0.82□□□□□ -2.28
VPS50-216ENST00000484954 SLC35A1P78382 337 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms