RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 FBXL19-AS1Q494R0 122 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 RNASE13Q5GAN3 156 aaKnown RBP2.25□□□□□ -2.05
SMC4-215ENST00000484799 SLC25A34Q6PIV7 304 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 UGT2A3Q6UWM9 527 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 LRRC8AQ8IWT6 810 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 RNF10Q8N5U6 811 aaKnown RBP2.25□□□□□ -2.05
SMC4-215ENST00000484799 TTLQ8NG68 377 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 OR4M2Q8NGB6 313 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 OR10G2Q8NGC3 310 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 OR2Y1Q8NGV0 311 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 LINC01560Q8TB33 94 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 IFT81Q8WYA0 676 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 GHSRQ92847 366 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 TMEM159Q96B96 161 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 LINC00477Q96M19 166 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 CATSPER2Q96P56 530 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 C20orf144Q9BQM9 153 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 SLC38A1Q9H2H9 487 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 TMBIM4Q9HC24 238 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 ABCB9Q9NP78 766 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 C12orf4Q9NQ89 552 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 OR2S2Q9NQN1 319 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 ZNHIT6Q9NWK9 470 aaKnown RBP2.25□□□□□ -2.05
SMC4-215ENST00000484799 MRM2Q9UI43 246 aaKnown RBP2.25□□□□□ -2.05
SMC4-215ENST00000484799 MYO10Q9HD67 2058 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 HIVEP2P31629 2446 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 IGHV6-1A0A0B4J1U7 121 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 CRXO43186 299 aaPredicted RBP2.24□□□□□ -2.05
SMC4-215ENST00000484799 NDUFS5O43920 106 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 NQO2P16083 231 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 PAX6P26367 422 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 RPA3P35244 121 aaPredicted RBP2.24□□□□□ -2.05
SMC4-215ENST00000484799 PPP1CAP62136 330 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 ADIGQ0VDE8 80 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 SYCP1Q15431 976 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 GUSBP1Q15486 140 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 ATP6AP1LQ52LC2 224 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 TEX30Q5JUR7 227 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 SAXO2Q658L1 398 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 PDPK2PQ6A1A2 396 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 MRPL52Q86TS9 123 aaKnown RBP2.24□□□□□ -2.05
SMC4-215ENST00000484799 SPATA24Q86W54 205 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 LRRC6Q86X45 466 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 CDRT4Q8N9R6 151 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 SYNPRQ8TBG9 265 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 PDCD6IPQ8WUM4 868 aaKnown RBP2.24□□□□□ -2.05
SMC4-215ENST00000484799 C17orf50Q8WW18 174 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 SLC25A46Q96AG3 418 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 LRRC45Q96CN5 670 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 OR10C1Q96KK4 312 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 SERPINB11Q96P15 392 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 ZNF430Q9H8G1 570 aaPredicted RBP2.24□□□□□ -2.05
SMC4-215ENST00000484799 PLEKHA1Q9HB21 404 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 DIABLOQ9NR28 239 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 MAT2BQ9NZL9 334 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 DNAJC27Q9NZQ0 273 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 PRO0628Q9UI54 55 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 ANXA10Q9UJ72 324 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 POFUT2Q9Y2G5 429 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 PPIL1Q9Y3C6 166 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 LRRC42Q9Y546 428 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 YTHDF2Q9Y5A9 579 aaKnown RBP2.24□□□□□ -2.05
SMC4-215ENST00000484799 ORC6Q9Y5N6 252 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 USH1CQ9Y6N9 552 aa2.24□□□□□ -2.05
SMC4-215ENST00000484799 IGSF9BQ9UPX0 1349 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 NUP214P35658 2090 aaPredicted RBP2.23□□□□□ -2.05
SMC4-215ENST00000484799 DOCK9Q9BZ29 2069 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 IGLV2-18A0A075B6J9 118 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 IGHV3-49A0A0A0MS15 119 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 ISPDA4D126 451 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 UPK2O00526 184 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 UBDO15205 165 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 RBBP9O75884 186 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 OR4Q2P0C623 313 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 ZNF286BP0CG31 522 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 HLA-GP17693 338 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 RAB38P57729 211 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 IL5RAQ01344 420 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 PIGHQ14442 188 aaPredicted RBP2.23□□□□□ -2.05
SMC4-215ENST00000484799 BSXQ3C1V8 233 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 C5orf47Q569G3 176 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 ZNF684Q5T5D7 378 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 KDM4DQ6B0I6 523 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 HBMQ6B0K9 141 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 ZFP1Q6P2D0 407 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 SSX7Q7RTT5 188 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 FAM19A1Q7Z5A9 133 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 SPICQ8N5J4 248 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 ATPAF2Q8N5M1 289 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 OR8G5Q8NG78 346 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 OR5M1Q8NGP8 315 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 CLHC1Q8NHS4 586 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 GTF2H4Q92759 462 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 HGDQ93099 445 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 L3HYPDHQ96EM0 354 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 METTL26Q96S19 204 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 DOK1Q99704 481 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 SPIN2AQ99865 258 aa2.23□□□□□ -2.05
SMC4-215ENST00000484799 SPIN2BQ9BPZ2 258 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms