RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CCL15-CCL14A0A0B4J2E2 113 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 C1orf232A0A0U1RR37 186 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 A0A1W2PP18 115 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 WI2-2373I1.2A0A1W2PRP0 233 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 TMEM223A0PJW6 202 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 ISPDA4D126 451 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 FABP12A6NFH5 140 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 UBDO15205 165 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 FABP7O15540 132 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CRXO43186 299 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CCDC22O60826 627 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 APCSP02743 223 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 PSG2P11465 335 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CD40LGP29965 261 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 TUFMP49411 452 aaKnown RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 TTPAP49638 278 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 PLTPP55058 493 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 AQP5P55064 265 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 UBE2G2P60604 165 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 SYCNQ0VAF6 134 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 TRIP13Q15645 432 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 SNRNP35Q16560 246 aaKnown RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CCL15Q16663 113 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CEACAM21Q3KPI0 293 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CCDC122Q5T0U0 273 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 CLEC19AQ6UXS0 136 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 PLEKHG7Q6ZR37 379 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 Q6ZSR6 202 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 BOD1L2Q8IYS8 172 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 OR4M1Q8NGD0 313 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 OR4K5Q8NGD3 323 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 OR13G1Q8NGZ3 307 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 OR2AE1Q8NHA4 323 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 TNFRSF14Q92956 283 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 MRPL48Q96GC5 212 aaKnown RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 RBBP8Q99708 897 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 UPF3BQ9BZI7 483 aaKnown RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 FGF23Q9GZV9 251 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-211ENST00000484581 DSN1Q9H410 356 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 PLEKHF2Q9H8W4 249 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 SLC38A10Q9HBR0 1119 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 C1orf109Q9NX04 203 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF222Q9UK12 451 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 ANKRD12Q6UB98 2062 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 DOCK9Q9BZ29 2069 aa2.94□□□□□ -1.94
VPS13A-211ENST00000484581 ABCB11O95342 1321 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 OR5H1A6NKK0 313 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 H0YJW9 148 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 TMX2-CTNND1H3BSU7 103 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 EIF1BO60739 113 aaKnown RBP2.93□□□□□ -1.94
VPS13A-211ENST00000484581 NIPSNAP2O75323 286 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 MYO1DO94832 1006 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF688P0C7X2 276 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 RD3LP0DJH9 198 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF3P17036 446 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 MDKP21741 143 aaPredicted RBP2.93□□□□□ -1.94
VPS13A-211ENST00000484581 EIF1P41567 113 aaKnown RBP2.93□□□□□ -1.94
VPS13A-211ENST00000484581 OR10A3P58181 314 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 TAS2R31P59538 309 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 ADIGQ0VDE8 80 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 RAB31Q13636 194 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 PIGHQ14442 188 aaPredicted RBP2.93□□□□□ -1.94
VPS13A-211ENST00000484581 PMVKQ15126 192 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 SHHQ15465 462 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF658BQ4V348 819 aaPredicted RBP2.93□□□□□ -1.94
VPS13A-211ENST00000484581 C2orf83Q53S99 150 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 OR10J3Q5JRS4 329 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 GUSBP11Q6P575 273 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 LINC01551Q86U37 167 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 BBS7Q8IWZ6 715 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 RIMKLAQ8IXN7 391 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 PGAM4Q8N0Y7 254 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 OR5AK3PQ8NH89 298 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 HGDQ93099 445 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 CCDC127Q96BQ5 260 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 S100PBPQ96BU1 408 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 NARS2Q96I59 477 aaKnown RBP2.93□□□□□ -1.94
VPS13A-211ENST00000484581 OR10C1Q96KK4 312 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 METTL26Q96S19 204 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 C7orf50Q9BRJ6 194 aaKnown RBP2.93□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF649Q9BS31 505 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 WDR54Q9H977 334 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 ANAPC11Q9NYG5 84 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 PSMD13Q9UNM6 376 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 LRRC42Q9Y546 428 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 TMEM14AQ9Y6G1 99 aa2.93□□□□□ -1.94
VPS13A-211ENST00000484581 ADAMTSL3P82987 1691 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 KIAA0232Q92628 1395 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 IGHV7-4-1A0A0J9YVY3 117 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 UPK1AO00322 258 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 TOX3O15405 576 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 SPAG7O75391 227 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 GATBO75879 557 aaKnown RBP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 SNAP29O95721 258 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 IGLV2-8P01709 118 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 OR56A5P0C7T3 313 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 DRD3P35462 400 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 KIR3DL2P43630 455 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms