RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RAB11AP62491 216 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 RPL18AQ02543 176 aaKnown RBP0.86□□□□□ -2.27
SCAF11-207ENST00000484275 ZNF33AQ06730 810 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 SPAG1Q07617 926 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 C2orf54Q08AI8 447 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 RAB11BQ15907 218 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 HADHQ16836 314 aaKnown RBP0.86□□□□□ -2.27
SCAF11-207ENST00000484275 RPEL1Q2QD12 228 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 KLHL40Q2TBA0 621 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 TPRG1LQ5T0D9 272 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 PLCXD3Q63HM9 321 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 PAGE2Q7Z2X7 111 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 TMCO2Q7Z6W1 182 aaPredicted RBP0.86□□□□□ -2.27
SCAF11-207ENST00000484275 RAB43Q86YS6 212 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 OFCC1Q8IZS5 231 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 KIF2BQ8N4N8 673 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 EIF4E3Q8N5X7 224 aaKnown RBP0.86□□□□□ -2.27
SCAF11-207ENST00000484275 OR1S1Q8NH92 325 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 GPX8Q8TED1 209 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 ITLN2Q8WWU7 325 aaPredicted RBP0.86□□□□□ -2.27
SCAF11-207ENST00000484275 PEX13Q92968 403 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 FXYD5Q96DB9 178 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 SNF8Q96H20 258 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 REEP1Q9H902 201 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 FAM60AQ9NP50 221 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 OR2S2Q9NQN1 319 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 CHRAC1Q9NRG0 131 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 DDX19BQ9UMR2 479 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 ZNF257Q9Y2Q1 563 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 WDR19Q8NEZ3 1342 aa0.86□□□□□ -2.27
SCAF11-207ENST00000484275 NCF1BA6NI72 391 aaPredicted RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 SLC22A20A6NK97 555 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 NCF1CA8MVU1 366 aaPredicted RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 HACD1B0YJ81 288 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 LINC01619G3V211 115 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 H3BN98 237 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 TRDMT1O14717 391 aaKnown RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CTNSO60931 367 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 NPHP4O75161 1426 aaPredicted RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 MPDU1O75352 247 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 ENTPD6O75354 484 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 ZNF708P17019 499 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CXCR1P25024 350 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 IL3RAP26951 378 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CD82P27701 267 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CCT6AP40227 531 aaKnown RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CLDN6P56747 220 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CLDN8P56748 225 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 IRF8Q02556 426 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 TRDNQ13061 729 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 PIP5KL1Q5T9C9 394 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 STEAP4Q687X5 459 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 MRPL21Q7Z2W9 205 aaKnown RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 FAM122BQ7Z309 247 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 PDPNQ86YL7 162 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 LRRC8AQ8IWT6 810 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CMTM8Q8IZV2 173 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 DAW1Q8N136 415 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 RNF10Q8N5U6 811 aaKnown RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 WDR31Q8NA23 367 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 AGR3Q8TD06 166 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CA5BP1Q8WTZ4 195 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 ISOC2Q96AB3 205 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 APH1AQ96BI3 265 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 SMARCD1Q96GM5 515 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 RDH12Q96NR8 316 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 SCGB3A2Q96PL1 93 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 NAPGQ99747 312 aaPredicted RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 ANP32EQ9BTT0 268 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 BLZF1Q9H2G9 400 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 ARMC7Q9H6L4 198 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 C8orf33Q9H7E9 229 aaPredicted RBP0.85□□□□□ -2.27
SCAF11-207ENST00000484275 FANCEQ9HB96 536 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 FBXO8Q9NRD0 319 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 HEBP1Q9NRV9 189 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 INIPQ9NRY2 104 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 ADA2Q9NZK5 511 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 CES1P1Q9UKY3 287 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 PSME2Q9UL46 239 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 AQRO60306 1485 aaKnown RBP eCLIP0.85□□□□□ -2.278e-11■□□□□ 11.3
SCAF11-207ENST00000484275 MROH7Q68CQ1 1323 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 TTC41PQ6P2S7 1318 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 PHLPP2Q6ZVD8 1323 aa0.85□□□□□ -2.27
SCAF11-207ENST00000484275 SPATA31E1Q6ZUB1 1445 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 A0A0B4J2E0 115 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 A0A1W2PRF3 423 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 A0A1W2PRM7 423 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 ZNF99A8MXY4 864 aaPredicted RBP0.84□□□□□ -2.27
SCAF11-207ENST00000484275 GGTLC3B5MD39 225 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 ZNF701M0R085 212 aaPredicted RBP0.84□□□□□ -2.27
SCAF11-207ENST00000484275 AKR7A2O43488 359 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 SMC2O95347 1197 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 CATP04040 527 aaKnown RBP0.84□□□□□ -2.27
SCAF11-207ENST00000484275 ARL2P36404 184 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 PEX19P40855 299 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 MTPNP58546 118 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 DAOAP59103 153 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 INCA1Q0VD86 236 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 MAPRE2Q15555 327 aa0.84□□□□□ -2.27
SCAF11-207ENST00000484275 OR1Q1Q15612 314 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms