RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.47□□□□□ -1.532e-11■■□□□ 12.9
CLK1-212ENST00000482590 ARFGEF3Q5TH69 2177 aa5.46□□□□□ -1.53
CLK1-212ENST00000482590 IGHV3-15A0A0B4J1V0 119 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 NPIPA5A0A0B4J1W7 369 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 TMEM213A2RRL7 107 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 PRSS37A4D1T9 235 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 CCDC182A6NF36 153 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 FABP12A6NFH5 140 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 SMIM23A6NLE4 172 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 TMEM114B3SHH9 223 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 G3V2L1 256 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 PLIN3O60664 434 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 GCM2O75603 506 aaPredicted RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 KRT33AO76009 404 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 SOX30O94993 753 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 NXPH2O95156 264 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 IFNA2P01563 188 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 HMGN2P05204 90 aaKnown RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 SOD3P08294 240 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 ZNF26P17031 533 aaPredicted RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 EFNA1P20827 205 aaPredicted RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 MAP3K8P41279 467 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 CDKN2CP42773 168 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 CDH11P55287 796 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 DNAJB13P59910 316 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 KIAA0040Q15053 153 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 TSC22D1Q15714 1073 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 NRF1Q16656 503 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 TTMPQ5BVD1 217 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 DCST2Q5T1A1 773 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 HHATQ5VTY9 493 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 C22orf42Q6IC83 251 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 ADAM5Q6NVV9 412 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 C3orf33Q6P1S2 294 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 SYS1Q8N2H4 156 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 KLHDC1Q8N7A1 406 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 INO80EQ8NBZ0 244 aaPredicted RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 MAPK1IP1LQ8NDC0 245 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 ATP6V1C2Q8NEY4 427 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 DMBX1Q8NFW5 382 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 OR4C3Q8NH37 302 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 MAGEE2Q8TD90 523 aaPredicted RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 SMAP2Q8WU79 429 aaPredicted RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 HSD17B8Q92506 261 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 MAP1LC3CQ9BXW4 147 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 SRXN1Q9BYN0 137 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 REG4Q9BYZ8 158 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 OR51V1Q9H2C8 321 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 FAF1Q9UNN5 650 aaPredicted RBP5.46□□□□□ -1.54
CLK1-212ENST00000482590 PTGDR2Q9Y5Y4 395 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 ALPK2Q86TB3 2170 aa5.46□□□□□ -1.54
CLK1-212ENST00000482590 A0A1W2PRD5 423 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 RNF212BA8MTL3 300 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 M0R3G1 203 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 CFLARO15519 480 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 SNAI2O43623 268 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 CD5LO43866 347 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 LYZL6O75951 148 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 IGHV4-39P01824 125 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 BGNP21810 368 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 CBLP22681 906 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 DCKP27707 260 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 SHC1P29353 583 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 ACVR1BP36896 505 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 HSPA13P48723 471 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 TMEM50BP56557 158 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 BSPH1Q075Z2 132 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 P2RY6Q15077 328 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 TMEM176BQ3YBM2 270 aaPredicted RBP5.45□□□□□ -1.54
CLK1-212ENST00000482590 CHRFAM7AQ494W8 412 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 ZNF672Q499Z4 452 aaPredicted RBP5.45□□□□□ -1.54
CLK1-212ENST00000482590 COQ5Q5HYK3 327 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 LY6G6FQ5SQ64 297 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 ASPHD1Q5U4P2 390 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 C9orf135Q5VTT2 229 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 C9orf47Q6ZRZ4 202 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 C19orf35Q6ZS72 473 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 RNF165Q6ZSG1 346 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 SSX8Q7RTT4 187 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 SLC16A14Q7RTX9 510 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 FAM122BQ7Z309 247 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 NUFIP2Q7Z417 695 aaKnown RBP5.45□□□□□ -1.54
CLK1-212ENST00000482590 APRG1Q8IVJ8 170 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 C4orf33Q8N1A6 199 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 NATD1Q8N6N6 113 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 NECAP1Q8NC96 275 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 OR10A7Q8NGE5 316 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 OR4C15Q8NGM1 316 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 OR2T11Q8NH01 316 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 OR52E5Q8NH55 327 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 SFXN5Q8TD22 340 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 TWIST2Q8WVJ9 160 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 TMEM239Q8WW34 195 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 NEUROG1Q92886 237 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 PPP1R14BQ96C90 147 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 MUCL1Q96DR8 90 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 DUS3LQ96G46 650 aaKnown RBP5.45□□□□□ -1.54
CLK1-212ENST00000482590 SLC35G5Q96KT7 338 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 FCRL1Q96LA6 429 aa5.45□□□□□ -1.54
CLK1-212ENST00000482590 PPP3R2Q96LZ3 170 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms