RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 S100A10P60903 97 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 HFEQ30201 348 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 SNAI3Q3KNW1 292 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 C10orf128Q5T292 105 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 OR2A2Q6IF42 318 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 FOXRED2Q8IWF2 684 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 TMEM123Q8N131 208 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 SVBPQ8N300 66 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 ADAMTS17Q8TE56 1095 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 CHST5Q9GZS9 411 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 NELFAQ9H3P2 528 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 LIME1Q9H400 295 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 ELL3Q9HB65 397 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-220ENST00000482507 PROK2Q9HC23 129 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 MMP26Q9NRE1 261 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF701Q9NV72 531 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-220ENST00000482507 HPF1Q9NWY4 346 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 LPAR3Q9UBY5 353 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 ARID1AO14497 2285 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 ZFHX4Q86UP3 3567 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 A0A0U1RQV5 110 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 F8W036 122 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 SFTPBP07988 381 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 JMJD7P0C870 316 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 CCL3P10147 92 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 NPBWR1P48145 328 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 BLOC1S1P78537 153 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 RBM39Q14498 530 aaKnown RBP12.98□□□□□ -0.33
ATG4B-220ENST00000482507 CHRFAM7AQ494W8 412 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 GALNTL5Q7Z4T8 443 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 GJC3Q8NFK1 279 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 FBXO17Q96EF6 278 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 SCGB3A2Q96PL1 93 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 STRADBQ9C0K7 418 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
ATG4B-220ENST00000482507 MASP2O00187 686 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 TLX3O43711 291 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF708P17019 499 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 GABRR1P24046 479 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 ACKR3P25106 362 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 OTX1P32242 354 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-220ENST00000482507 LPAR6P43657 344 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF84P51523 738 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 HIST1H3AP68431 136 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 HIST2H3PS2Q5TEC6 136 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 H3F3CQ6NXT2 135 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 FOXL2NBQ6ZUU3 175 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 HIST2H3AQ71DI3 136 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 ZIC4Q8N9L1 334 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 SEMA6DQ8NFY4 1073 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 HAS2Q92819 552 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 EMG1Q92979 244 aaKnown RBP12.97□□□□□ -0.33
ATG4B-220ENST00000482507 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 RBM24Q9BX46 236 aaKnown RBP12.97□□□□□ -0.33
ATG4B-220ENST00000482507 HRH4Q9H3N8 390 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 GHRLQ9UBU3 117 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 PROB1E7EW31 1015 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF205O95201 554 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 HKR1P10072 659 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 DCAF12Q5T6F0 453 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 Q6ZSR3 168 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 OR5T2Q8NGG2 359 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 OR10Z1Q8NGY1 313 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 MR1Q95460 341 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 CNTNAP3BQ96NU0 1288 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 GPR173Q9NS66 373 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 UQCC1Q9NVA1 299 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 PCDHGA1Q9Y5H4 931 aa12.97□□□□□ -0.33
ATG4B-220ENST00000482507 M0R135 149 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 ZIC3O60481 467 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 MUC1P15941 1255 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF133P52736 654 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-220ENST00000482507 HGFACQ04756 655 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 PJVKQ0ZLH3 352 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 FAM189A2Q15884 450 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 NSUN5P2Q63ZY6 315 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 OR2AE1Q8NHA4 323 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 SGK3Q96BR1 496 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF799Q96GE5 643 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 SMIM8Q96KF7 97 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF2Q9BSG1 426 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-220ENST00000482507 SAV1Q9H4B6 383 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-220ENST00000482507 FOXJ2Q9P0K8 574 aa12.96□□□□□ -0.33
ATG4B-220ENST00000482507 C19orf25Q9UFG5 118 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-220ENST00000482507 CFAP47Q6ZTR5 3102 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 C9orf172C9J069 976 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 DHHO43323 396 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 ANGPTL7O43827 346 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 IFNA2P01563 188 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 CPT2P23786 658 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 ID4P47928 161 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 EIF3IQ13347 325 aaKnown RBP12.96□□□□□ -0.34
ATG4B-220ENST00000482507 OR9K2Q8NGE7 335 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 PP6455Q8WZ26 134 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 Q96M66 194 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 DNAJB11Q9UBS4 358 aa12.96□□□□□ -0.34
ATG4B-220ENST00000482507 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.34
ATG4B-220ENST00000482507 PRELID3BQ9Y3B1 194 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms