RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 LIN37Q96GY3 246 aaPredicted RBP10.02□□□□□ -0.8
SMPD4-218ENST00000482171 KIRREL1Q96J84 757 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 UQCC1Q9NVA1 299 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 ZNF230Q9UIE0 474 aaPredicted RBP10.02□□□□□ -0.8
SMPD4-218ENST00000482171 MED19A0JLT2 244 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 SLC22A20A6NK97 555 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ADRA2AP08913 450 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 RPL23AP62750 156 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 SLC25A26Q70HW3 274 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 OVCH2Q7RTZ1 564 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 CPNE4Q96A23 557 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ADIPOR1Q96A54 375 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MALSU1Q96EH3 234 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 GAR1Q9NY12 217 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MRPS18BQ9Y676 258 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 CUL9Q8IWT3 2517 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 TRGV5A0A0B4J1U4 118 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MFSD2BA6NFX1 497 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ZNF724A8MTY0 619 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 PHOX2AO14813 284 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 XRCC2O43543 280 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 IL2RGP31785 369 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MEOX1P50221 254 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 NANOS3P60323 173 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ZNF239Q16600 458 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ISXQ2M1V0 245 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 RGS7BPQ6MZT1 257 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 FAM219AQ8IW50 185 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 TMEM229BQ8NBD8 167 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 OR2G3Q8NGZ4 309 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 RAB33BQ9H082 229 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MOB1AQ9H8S9 216 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MED9Q9NWA0 146 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 TRAV8-7A0A075B6U6 113 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ZFP92A6NM28 416 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 CTDSPLO15194 276 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 OGG1O15527 345 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ZNHIT1O43257 154 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 KCNAB3O43448 404 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ADAM11O75078 769 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 IGLV3-19P01714 112 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MPPED2Q15777 294 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 NCMAPQ5T1S8 102 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ZNF660Q6AZW8 331 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 RPUSD3Q6P087 351 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 OR2M3Q8NG83 312 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 OR6S1Q8NH40 331 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 LILRB1Q8NHL6 650 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 APOBEC4Q8WW27 367 aaKnown RBP10.02□□□□□ -0.81
SMPD4-218ENST00000482171 ASB10Q8WXI3 467 aa10.02□□□□□ -0.81
SMPD4-218ENST00000482171 MSTNO14793 375 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 PHF1O43189 567 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-218ENST00000482171 WNT11O96014 354 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 RAC2P15153 192 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 PNLIPP16233 465 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 INSM1Q01101 510 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-218ENST00000482171 ZNF766Q5HY98 468 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 PUSL1Q8N0Z8 303 aaKnown RBP10.01□□□□□ -0.81
SMPD4-218ENST00000482171 OR52N4Q8NGI2 321 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 OR5M8Q8NGP6 311 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 AMELYQ99218 206 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 MMP26Q9NRE1 261 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 HS3ST3B1Q9Y662 390 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 NFYBP25208 207 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 SRD5A2P31213 254 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 CD96P40200 585 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 FABP6P51161 128 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 RAB11AP62491 216 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 C20orf196Q8IYI0 205 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 OR1J1Q8NGS3 322 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 ABHD3Q8WU67 409 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 SLC25A31Q9H0C2 315 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 LHX6Q9UPM6 363 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 FREM3P0C091 2139 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 OR4C45A6NMZ5 311 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
SMPD4-218ENST00000482171 ARG1P05089 322 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 VSIG10L2P0DP72 767 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 MAGEA5P43359 124 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 RAB1AP62820 205 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 NHLRC3Q5JS37 347 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 IL34Q6ZMJ4 242 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 MRGPREQ86SM8 312 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 GVQW1Q8N7I0 195 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 ASB13Q8WXK3 278 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 ZNF385AQ96PM9 386 aaKnown RBP10.01□□□□□ -0.81
SMPD4-218ENST00000482171 SPSB2Q99619 263 aa10.01□□□□□ -0.81
SMPD4-218ENST00000482171 MRPL22Q9NWU5 206 aaKnown RBP10.01□□□□□ -0.81
SMPD4-218ENST00000482171 TAAR5O14804 337 aa10□□□□□ -0.81
SMPD4-218ENST00000482171 SNRNP200O75643 2136 aaKnown RBP10□□□□□ -0.81
SMPD4-218ENST00000482171 LY86O95711 162 aa10□□□□□ -0.81
SMPD4-218ENST00000482171 ZNF728P0DKX0 622 aa10□□□□□ -0.81
SMPD4-218ENST00000482171 RPS2P15880 293 aaKnown RBP10□□□□□ -0.81
SMPD4-218ENST00000482171 RAB4BP61018 213 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms