RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SRSF10O75494 262 aaKnown RBP9.43□□□□□ -0.9
CCM2-213ENST00000480658 NXPH2O95156 264 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 PGA5P0DJD9 388 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 FAHP16930 419 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 MPZP25189 248 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 RBMXP38159 391 aaKnown RBP9.43□□□□□ -0.9
CCM2-213ENST00000480658 IER3P46695 156 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 GABRA2P47869 451 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 CAPZA1P52907 286 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 IL24Q13007 206 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 MRPL28Q13084 256 aaKnown RBP9.43□□□□□ -0.9
CCM2-213ENST00000480658 AANATQ16613 207 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 SLC25A30Q5SVS4 291 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 C11orf88Q6PI97 169 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 LIAT1Q6ZQX7 453 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 ENTHD1Q8IYW4 607 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 TMEM185AQ8NFB2 350 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 CPNE2Q96FN4 548 aaPredicted RBP9.43□□□□□ -0.9
CCM2-213ENST00000480658 GAFA1Q96PS6 74 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 WDR13Q9H1Z4 485 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 RASSF4Q9H2L5 321 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 COPS3Q9UNS2 423 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 SLC22A13Q9Y226 551 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 PQLC2LA1A4F0 135 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 TIMM23O14925 209 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 NPFFO15130 113 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 RBP4P02753 201 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 PSG2P11465 335 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 TGFBR2P37173 567 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 FUT6P51993 359 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 MFGE8Q08431 387 aaPredicted RBP9.42□□□□□ -0.9
CCM2-213ENST00000480658 OCLNQ16625 522 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 DGUOKQ16854 277 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 TMEM244Q5VVB8 128 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 RUSC1-AS1Q66K80 236 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 OLFML2AQ68BL7 652 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 ACP7Q6ZNF0 438 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 CCDC121Q6ZUS5 278 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 OR10H4Q8NGA5 316 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 OR14K1Q8NGZ2 314 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 Q96MT0 163 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 CHIAQ9BZP6 476 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 CHST5Q9GZS9 411 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 RIBC2Q9H4K1 309 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 HEXA-AS1Q9H8Q6 139 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 RHOFQ9HBH0 211 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 SNTG1Q9NSN8 517 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 USE1Q9NZ43 259 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 ZNRD1Q9P1U0 126 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 GLS2Q9UI32 602 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 MRM2Q9UI43 246 aaKnown RBP9.42□□□□□ -0.9
CCM2-213ENST00000480658 ZNF222Q9UK12 451 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 PCDHGB5Q9Y5G0 923 aa9.42□□□□□ -0.9
CCM2-213ENST00000480658 IGKV1D-17A0A075B6S4 117 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 A0A1W2PQL4 384 aaPredicted RBP9.41□□□□□ -0.9
CCM2-213ENST00000480658 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 H3BUI4 141 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 M0QZ24 198 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 MITFO75030 526 aaPredicted RBP9.41□□□□□ -0.9
CCM2-213ENST00000480658 RHBDL1O75783 438 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 OCM2P0CE71 109 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 OCMP0CE72 109 aaPredicted RBP9.41□□□□□ -0.9
CCM2-213ENST00000480658 ALDH3A2P51648 485 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 HCCSP53701 268 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 GMFBP60983 142 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 RPL31P62899 125 aaKnown RBP9.41□□□□□ -0.9
CCM2-213ENST00000480658 DHRS7BQ6IAN0 325 aaPredicted RBP9.41□□□□□ -0.9
CCM2-213ENST00000480658 ASRGL1Q7L266 308 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 AMIGO2Q86SJ2 522 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 CATSPERDQ86XM0 798 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 DNAAF1Q8NEP3 725 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 OR5T2Q8NGG2 359 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 PPP1R35Q8TAP8 253 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 SPSB1Q96BD6 273 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 BORCS8Q96FH0 119 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 HRASLS5Q96KN8 279 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 APOL4Q9BPW4 351 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 HES4Q9HCC6 221 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 SIRT7Q9NRC8 400 aa9.41□□□□□ -0.9
CCM2-213ENST00000480658 A0A0U1RQK1 487 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 MDFIC2A0A1B0GVS7 189 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 MEIOCA2RUB1 952 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 RPP14O95059 124 aaKnown RBP9.4□□□□□ -0.9
CCM2-213ENST00000480658 ISG15P05161 165 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 ALPLP05186 524 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 CHRM2P08172 466 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 PRKACBP22694 351 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 PRDX2P32119 198 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 SAA4P35542 130 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 RBP2P50120 134 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 CCR9P51686 369 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 ERVFRD-1P60508 538 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 SNRPGP62308 76 aaKnown RBP9.4□□□□□ -0.9
CCM2-213ENST00000480658 HOXA4Q00056 320 aaPredicted RBP9.4□□□□□ -0.9
CCM2-213ENST00000480658 ZBTB49Q6ZSB9 765 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 MKXQ8IYA7 352 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms