RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MPZP25189 248 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 TNFAIP6P98066 277 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-206ENST00000480362 IL24Q13007 206 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 UNC119Q13432 240 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 SWI5Q1ZZU3 235 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 PRAMEF6Q5VXH4 476 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 SP5Q6BEB4 398 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-206ENST00000480362 CNIH2Q6PI25 160 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 DTX3Q8N9I9 347 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 TMEM104Q8NE00 496 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 AQP3Q92482 292 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 FBXW5Q969U6 566 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 FAM46BQ96A09 425 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 SLAMF9Q96A28 289 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 PTX4Q96A99 478 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 DIRC2Q96SL1 478 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 ABCG5Q9H222 651 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 BANF2Q9H503 90 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 AKIP1Q9NQ31 210 aa14.91□□□□□ -0.02
UPF3A-206ENST00000480362 SPTBN1Q01082 2364 aaKnown RBP14.91□□□□□ -0.02
UPF3A-206ENST00000480362 A0A1W2PP11 408 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 CDIPTO14735 213 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 CDC14BO60729 498 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 RHBDL1O75783 438 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 MPIG6BO95866 241 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 CSTBP04080 98 aaKnown RBP14.9□□□□□ -0.02
UPF3A-206ENST00000480362 ADH4P08319 380 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 INHBBP09529 407 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 RAB6AP20340 208 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 TNFSF4P23510 183 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 SRP9P49458 86 aaKnown RBP14.9□□□□□ -0.02
UPF3A-206ENST00000480362 GPR176Q14439 515 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 MPPED2Q15777 294 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 SPRNQ5BIV9 151 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 TMEM200AQ86VY9 491 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 C11orf53Q8IXP5 236 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 OR4M1Q8NGD0 313 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 ITLN1Q8WWA0 313 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 S100ZQ8WXG8 99 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 RAB40AQ8WXH6 277 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 S100A16Q96FQ6 103 aaKnown RBP14.9□□□□□ -0.02
UPF3A-206ENST00000480362 MEGF10Q96KG7 1140 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 OR2V2Q96R30 315 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 GAL3ST1Q99999 423 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 CST11Q9H112 138 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 ATG5Q9H1Y0 275 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 DYNLRB1Q9NP97 96 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 UFSP2Q9NUQ7 469 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 IL36GQ9NZH8 169 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 MTCH1Q9NZJ7 389 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 EXTL2Q9UBQ6 330 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 IL19Q9UHD0 177 aa14.9□□□□□ -0.02
UPF3A-206ENST00000480362 A6NLC8 198 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 TRAPPC2LH3BP13 241 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 ZNF780AO75290 641 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-206ENST00000480362 KDM4BO94953 1096 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 PTBP3O95758 552 aaKnown RBP14.89□□□□□ -0.03
UPF3A-206ENST00000480362 BCL3P20749 454 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 ETV6P41212 452 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 NPBWR2P48146 333 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 MADCAM1Q13477 382 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 SPANXN2Q5MJ10 180 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 ZNF826PQ6ZT77 177 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 BIVMQ86UB2 503 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 BATF2Q8N1L9 274 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 ZCCHC24Q8N2G6 241 aaKnown RBP14.89□□□□□ -0.03
UPF3A-206ENST00000480362 MFSD4AQ8N468 514 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 CELF2-AS1Q8N7Q2 184 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 TLNRD1Q9H1K6 362 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 MS4A5Q9H3V2 200 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 PCDHB16Q9NRJ7 776 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 POLDIP2Q9Y2S7 368 aa14.89□□□□□ -0.03
UPF3A-206ENST00000480362 FAM221AA4D161 298 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 FABP12A6NFH5 140 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 CLDN25C9JDP6 229 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 CTAG2O75638 210 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 SFTPBP07988 381 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 CD55P08174 381 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 MGMTP16455 207 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 TALDO1P37837 337 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 SNRPD2P62316 118 aaKnown RBP14.88□□□□□ -0.03
UPF3A-206ENST00000480362 FAM131AQ6UXB0 335 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 CDH24Q86UP0 819 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 ZNF488Q96MN9 340 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 TMEM59Q9BXS4 323 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 SELENOIQ9C0D9 397 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 HMG20AQ9NP66 347 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 FAIMQ9NVQ4 179 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 C1orf123Q9NWV4 160 aa14.88□□□□□ -0.03
UPF3A-206ENST00000480362 ANKHD1Q8IWZ3 2542 aaKnown RBP14.87□□□□□ -0.03
UPF3A-206ENST00000480362 METTL21EPA6NDL7 271 aa14.87□□□□□ -0.03
UPF3A-206ENST00000480362 F8VVB4 439 aa14.87□□□□□ -0.03
UPF3A-206ENST00000480362 F8VWA3 439 aa14.87□□□□□ -0.03
UPF3A-206ENST00000480362 TPD52L2O43399 206 aaKnown RBP14.87□□□□□ -0.03
UPF3A-206ENST00000480362 DANCRP0C864 163 aa14.87□□□□□ -0.03
UPF3A-206ENST00000480362 GTF2F2P13984 249 aa14.87□□□□□ -0.03
UPF3A-206ENST00000480362 COX6B1P14854 86 aa14.87□□□□□ -0.03
UPF3A-206ENST00000480362 RPS27AP62979 156 aaKnown RBP14.87□□□□□ -0.03
UPF3A-206ENST00000480362 CCL8P80075 99 aa14.87□□□□□ -0.03
UPF3A-206ENST00000480362 ZNF45Q02386 682 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 1138.7 ms