RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NKX6-3A6NJ46 265 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.09■□□□□ 0.33
VARS-224ENST00000479051 TMPRSS2O15393 492 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 OGG1O15527 345 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 PHF1O43189 567 aaPredicted RBP17.09■□□□□ 0.33
VARS-224ENST00000479051 CD2P06729 351 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 HOXB4P17483 251 aaPredicted RBP17.09■□□□□ 0.33
VARS-224ENST00000479051 ZFP36P26651 326 aaKnown RBP17.09■□□□□ 0.33
VARS-224ENST00000479051 SRP14P37108 136 aaKnown RBP17.09■□□□□ 0.33
VARS-224ENST00000479051 RBP2P50120 134 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 RNLSQ5VYX0 342 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 SERPINA12Q8IW75 414 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 POC1AQ8NBT0 407 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 OR5D14Q8NGL3 314 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 ZNF184Q99676 751 aaPredicted RBP17.09■□□□□ 0.33
VARS-224ENST00000479051 MND1Q9BWT6 205 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 DNTTIP1Q9H147 329 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 NLKQ9UBE8 527 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 KAAG1Q9UBP8 84 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 BLOC1S6Q9UL45 172 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 ZNF281Q9Y2X9 895 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 PCDHGB5Q9Y5G0 923 aa17.09■□□□□ 0.33
VARS-224ENST00000479051 C2CD3Q4AC94 2353 aa17.08■□□□□ 0.33
VARS-224ENST00000479051 CYB5AP00167 134 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 SRD5A1P18405 259 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 MPZP25189 248 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 AZGP1P25311 298 aaKnown RBP17.08■□□□□ 0.32
VARS-224ENST00000479051 IL24Q13007 206 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 SMIM21Q3B7S5 101 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 CD276Q5ZPR3 534 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 WDR25Q64LD2 544 aaPredicted RBP17.08■□□□□ 0.32
VARS-224ENST00000479051 XAF1Q6GPH4 301 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 BTNL3Q6UXE8 466 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 LHFPL2Q6ZUX7 228 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 NANOGP1Q8N7R0 232 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 RPS4Y2Q8TD47 263 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 OPALINQ96PE5 141 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 WDR13Q9H1Z4 485 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 ZCCHC4Q9H5U6 513 aa17.08■□□□□ 0.32
VARS-224ENST00000479051 KIAA1324LA8MWY0 1029 aaPredicted RBP17.07■□□□□ 0.32
VARS-224ENST00000479051 TNFRSF13BO14836 293 aaPredicted RBP17.07■□□□□ 0.32
VARS-224ENST00000479051 SYNGR1O43759 233 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 NOS1APO75052 506 aaPredicted RBP17.07■□□□□ 0.32
VARS-224ENST00000479051 FAM157CP0CG43 387 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 PGA5P0DJD9 388 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 MTCP1P56278 107 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 STUMQ69YW2 141 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 DMKNQ6E0U4 476 aaPredicted RBP17.07■□□□□ 0.32
VARS-224ENST00000479051 IL17RELQ6ZVW7 336 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 ANGPTL5Q86XS5 388 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 PARP16Q8N5Y8 322 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 ZNF485Q8NCK3 441 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 CPNE2Q96FN4 548 aaPredicted RBP17.07■□□□□ 0.32
VARS-224ENST00000479051 CDCA4Q9BXL8 241 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 SNTG1Q9NSN8 517 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 CTSZQ9UBR2 303 aa17.07■□□□□ 0.32
VARS-224ENST00000479051 LOC105371242A0A075B767 164 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 OR2AT4A6NND4 320 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 NXPH2O95156 264 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 LALBAP00709 142 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 MT-ND2P03891 347 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 SLC35A2P78381 396 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 C11orf91Q3C1V1 193 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 YIF1BQ5BJH7 314 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 RBM48Q5RL73 367 aaKnown RBP17.06■□□□□ 0.32
VARS-224ENST00000479051 ZNF841Q6ZN19 808 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 CALHM1Q8IU99 346 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 MKXQ8IYA7 352 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 OR13C9Q8NGT0 318 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 GHSRQ92847 366 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 SEH1LQ96EE3 360 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 MED30Q96HR3 178 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 CCL13Q99616 98 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 MRI1Q9BV20 369 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 C7orf69Q9H7B7 122 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 SIRT4Q9Y6E7 314 aaPredicted RBP17.06■□□□□ 0.32
VARS-224ENST00000479051 NF1P21359 2839 aa17.06■□□□□ 0.32
VARS-224ENST00000479051 IGKV1-9A0A0C4DH69 117 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 TRAPPC2LH3BP13 241 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 MAGEB3O15480 346 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 RGS10O43665 173 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 NDUFB3O43676 98 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 ALX3O95076 343 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 PLATP00750 562 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 HCKP08631 526 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 ACAA1P09110 424 aaPredicted RBP17.05■□□□□ 0.32
VARS-224ENST00000479051 SOX2P48431 317 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 BDH1Q02338 343 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 SCGB2A2Q13296 93 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 LRRC10Q5BKY1 277 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 ATPAF1Q5TC12 328 aaPredicted RBP17.05■□□□□ 0.32
VARS-224ENST00000479051 ACP7Q6ZNF0 438 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 ZFP41Q8N8Y5 198 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 OR5T2Q8NGG2 359 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 ANGPTL6Q8NI99 470 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 RAB40AQ8WXH6 277 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 POM121Q96HA1 1249 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 NRIP2Q9BQI9 281 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 CCDC90BQ9GZT6 254 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 DUSP21Q9H596 190 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms