RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ACTR3P61158 418 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 YWHAEP62258 255 aaKnown RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 HPCAP84074 193 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 GNA12Q03113 381 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 PDIA2Q13087 525 aaKnown RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 STX3Q13277 289 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 ARFRP1Q13795 201 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 TRIP13Q15645 432 aaPredicted RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 TRIM16LQ309B1 348 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 CCDC153Q494R4 210 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF658BQ4V348 819 aaPredicted RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 RWDD4Q6NW29 188 aaKnown RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 DCUN1D2Q6PH85 259 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 KATNAL2Q8IYT4 538 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 C4orf33Q8N1A6 199 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 TTC29Q8NA56 475 aaPredicted RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 FAM172AQ8WUF8 416 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 LCN9Q8WX39 176 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 FRZBQ92765 325 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 CDKL2Q92772 493 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 OSTF1Q92882 214 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 PGLYRP4Q96LB8 373 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF641Q96N77 438 aaPredicted RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 CCT7Q99832 543 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 GAL3ST1Q99999 423 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 SLC35A5Q9BS91 424 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 POLR2J2Q9GZM3 115 aaKnown RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 POLR2J3Q9H1A7 115 aaKnown RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 RHBGQ9H310 441 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 GOLPH3Q9H4A6 298 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 PARVBQ9HBI1 364 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 C8orf4Q9NR00 106 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 RSL24D1Q9UHA3 163 aaKnown RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 SIGLEC9Q9Y336 463 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 UGT2A1Q9Y4X1 527 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 NINQ8N4C6 2090 aa3.28□□□□□ -1.89
CCDC171-207ENST00000478913 DOCK4Q8N1I0 1966 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 IGLV3-12A0A075B6K2 115 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 A0A1B0GWJ7 208 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 GOLGA8TH3BQL2 631 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 KPNA4O00629 521 aaPredicted RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 KMOO15229 486 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 DENRO43583 198 aaKnown RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 TPST2O60704 377 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 BCAS1O75363 584 aaPredicted RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 SUPT3HO75486 399 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 TRAPPC6AO75865 159 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 PROSCO94903 275 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 SERPINA6P08185 405 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 OCM2P0CE71 109 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 OCMP0CE72 109 aaPredicted RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 MYL2P10916 166 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 FGF9P31371 208 aaPredicted RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 ACAA2P42765 397 aaKnown RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 AQP5P55064 265 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 GTF2BQ00403 316 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 ENPEPQ07075 957 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 TFDP2Q14188 446 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 MAPRE2Q15555 327 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 TSC22D1Q15714 1073 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 DEFB112Q30KQ8 113 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 SLC36A3Q495N2 470 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 SFT2D3Q587I9 215 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 ACSBG2Q5FVE4 666 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 LGALS9CQ6DKI2 356 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 KCNIP4Q6PIL6 250 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 C3orf62Q6ZUJ4 267 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 ARPINQ7Z6K5 226 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 MOB3BQ86TA1 216 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 FAM71AQ8IYT1 594 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 OR56B4Q8NH76 319 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 UBA3Q8TBC4 463 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 TCP10LQ8TDR4 215 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 BORCS5Q969J3 196 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 S100PBPQ96BU1 408 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 JSRP1Q96MG2 331 aaPredicted RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 CSPG4P5Q96PW8 444 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 SDHCQ99643 169 aaPredicted RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 C1orf50Q9BV19 199 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 C16orf95Q9H693 158 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 XKR8Q9H6D3 395 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 ELOVL3Q9HB03 270 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 AGPAT3Q9NRZ7 376 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 TAS2R1Q9NYW7 299 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 PHF11Q9UIL8 331 aa3.27□□□□□ -1.89
CCDC171-207ENST00000478913 PRPF19Q9UMS4 504 aaKnown RBP3.27□□□□□ -1.89
CCDC171-207ENST00000478913 A0A087WXM4 84 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SIGLEC16A6NMB1 481 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 A8MUA0 341 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 H0YJX3 145 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 M0QX08 132 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF701M0R085 212 aaPredicted RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 RS1O15537 224 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 MED7O43513 233 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 LSM8O95777 96 aaKnown RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF17P17021 662 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 NCF2P19878 526 aaPredicted RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 BGNP21810 368 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 DRD5P21918 477 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms