RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 OR8B2Q96RD0 313 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 MND1Q9BWT6 205 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 SSBP3Q9BWW4 388 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 Q9H521 79 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 BABAM2Q9NXR7 383 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 MIOXQ9UGB7 285 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 TPRKBQ9Y3C4 175 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 SRRM5B3KS81 715 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 F5H0A9 414 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 J3QT63 122 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 TMPRSS2O15393 492 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 RGS10O43665 173 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 LHBP01229 141 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 MT-ND2P03891 347 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 RPSAP08865 295 aaKnown RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 GLRA1P23415 457 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 CRHBPP24387 322 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 AZGP1P25311 298 aaKnown RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 ZFP36P26651 326 aaKnown RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 PITPNBP48739 271 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 POU3F4P49335 361 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 GNB2P62879 340 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 SLC35A2P78381 396 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 DOC2BQ14184 412 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 MED22Q15528 200 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 FAM76BQ5HYJ3 339 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 FAM120AOSQ5T036 256 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 DCAF12L2Q5VW00 463 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 FAHD2BQ6P2I3 314 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 KRT74Q7RTS7 529 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF573Q86YE8 665 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 CALHM1Q8IU99 346 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 GHSRQ92847 366 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 RFT1Q96AA3 541 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 KCTD12Q96CX2 325 aaKnown RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 C10orf35Q96D05 121 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 NEIL1Q96FI4 390 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 FAHD2AQ96GK7 314 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 C1orf159Q96HA4 380 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 SHARPINQ9H0F6 387 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 CLN8Q9UBY8 286 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 LRCH1Q9Y2L9 728 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 IGKV1-27A0A075B6S5 117 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 TRAV20A0A0B4J274 112 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 IGKV1-9A0A0C4DH69 117 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 A0A0G2JMP0 313 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 A0A0X1KG70 313 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 A0A1B0GW55 424 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 FOXH1O75593 365 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 NXPH2O95156 264 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CD2P06729 351 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 HCKP08631 526 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 WNT2P09544 360 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4L2P0CJ85 424 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4L3P0CJ86 424 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4L4P0CJ87 422 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4L5P0CJ88 424 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4L6P0CJ89 424 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4L7P0CJ90 424 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 HSMCR30P0CW71 290 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CELP19835 753 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 HNF1AP20823 631 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 RBP2P50120 134 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 FUT6P51993 359 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DVL1P1P54792 670 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 MTCP1P56278 107 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 TAS2R43P59537 309 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 IKZF1Q13422 519 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 TEX36Q5VZQ5 186 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 C16orf87Q6PH81 154 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4L9Q6RFH8 374 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 UTS2BQ765I0 119 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 FAM216BQ8N7L0 139 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 NANOGP1Q8N7R0 232 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF485Q8NCK3 441 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR4M2Q8NGB6 313 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR5D18Q8NGL1 313 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR10Z1Q8NGY1 313 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF671Q8TAW3 534 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 GPR148Q8TDV2 347 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ST8SIA4Q92187 359 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 TMEM106AQ96A25 262 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SLAMF9Q96A28 289 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 TMIGD2Q96BF3 282 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OPALINQ96PE5 141 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR5M11Q96RB7 305 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CCL13Q99616 98 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 BEX2Q9BXY8 128 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 RASSF4Q9H2L5 321 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ZCCHC4Q9H5U6 513 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 NEK6Q9HC98 313 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CTSZQ9UBR2 303 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DUX4Q9UBX2 424 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR5V1Q9UGF6 321 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 BLOC1S6Q9UL45 172 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 POLDIP2Q9Y2S7 368 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF281Q9Y2X9 895 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 NKX6-3A6NJ46 265 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms