RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CACNA1DQ01668 2161 aa4.33□□□□□ -1.72
SF3B6-202ENST00000478050 FREM2Q5SZK8 3169 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 IGHV1-45A0A0A0MS14 117 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 A0A0B4J2A0 478 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 A0A0U1RQV5 110 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 C9orf170A2RU37 121 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 WIPF3A6NGB9 483 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 OR5H14A6NHG9 310 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 GJE1A6NN92 205 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF814B7Z6K7 855 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 BCL2L11O43521 198 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 DNPH1O43598 174 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 SSX5O60225 188 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CDC14BO60729 498 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CA11O75493 328 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 TUSC2O75896 110 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 DUS4LO95620 317 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 MPIG6BO95866 241 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 IGLV3-1P01715 115 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 IGHEP01854 428 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CSN2P05814 226 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 KLK3P07288 261 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HCKP08631 526 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF250P15622 560 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HIST1H1DP16402 221 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF17P17021 662 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 MSR1P21757 451 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 SFTPDP35247 375 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HRH1P35367 487 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 NUP62P37198 522 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ALDH3B1P43353 468 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 DUSP3P51452 185 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF84P51523 738 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 SSR4P51571 173 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 DSCR4P56555 118 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CLDN17P56750 224 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CSNK2A1P68400 391 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HIST1H3AP68431 136 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CYCSP99999 105 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 OC90Q02509 493 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ECH1Q13011 328 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 PPP1R1AQ13522 171 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 FHL2Q14192 279 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 PPA1Q15181 289 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 SGCAQ16586 387 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HLA-BQ31612 363 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM176BQ3YBM2 270 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 VAX1Q5SQQ9 334 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HIST2H3PS2Q5TEC6 136 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CARD17Q5XLA6 110 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 NSUN5P2Q63ZY6 315 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF660Q6AZW8 331 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 RTL6Q6ICC9 239 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 LCN10Q6JVE6 187 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 C11orf87Q6NUJ2 197 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 GLIPR1L1Q6UWM5 242 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 Q6ZSR3 168 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ACOT7LQ6ZUV0 252 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HIST2H3AQ71DI3 136 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 FAM57BQ71RH2 274 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ABHD12BQ7Z5M8 362 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 WDR5BQ86VZ2 330 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM17Q86X19 198 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 HOGA1Q86XE5 327 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ARRDC1Q8N5I2 433 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 EIF4E3Q8N5X7 224 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 WDSUB1Q8N9V3 476 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 PNLDC1Q8NA58 520 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 GJC3Q8NFK1 279 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 OR4S1Q8NGB4 309 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 OR14K1Q8NGZ2 314 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 OR4K15Q8NH41 348 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 COQ8AQ8NI60 647 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 THAP6Q8TBB0 222 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 IFI44Q8TCB0 444 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 SSC4DQ8WTU2 575 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 NUDCD2Q8WVJ2 157 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 PCNPQ8WW12 178 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 INTS12Q96CB8 462 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 NTNG2Q96CW9 530 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 C10orf35Q96D05 121 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CMBLQ96DG6 245 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 RAB3CQ96E17 227 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 WBP1Q96G27 269 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 FAM71F1Q96KD3 344 aaPredicted RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CXorf58Q96LI9 332 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 IMMP1LQ96LU5 166 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 GPER1Q99527 375 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 MESP1Q9BRJ9 268 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM59Q9BXS4 323 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ANGPTL4Q9BY76 406 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 SELENOIQ9C0D9 397 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 CST11Q9H112 138 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 PPA2Q9H2U2 334 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 NELFAQ9H3P2 528 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 PRORYQ9H606 182 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM185BQ9H7F4 350 aa4.32□□□□□ -1.72
SF3B6-202ENST00000478050 ZMAT3Q9HA38 289 aaKnown RBP4.32□□□□□ -1.72
SF3B6-202ENST00000478050 OCIAD1Q9NX40 245 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms