RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PAQR4Q8N4S7 273 aaPredicted RBP2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 EID2Q8N6I1 236 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 GATD1Q8NB37 220 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 OR4E2Q8NGC2 313 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 OR11H4Q8NGC9 324 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 OR4N2Q8NGD1 307 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 OR13G1Q8NGZ3 307 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 ZNF420Q8TAQ5 688 aaPredicted RBP2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 SFXN5Q8TD22 340 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 IGFBPL1Q8WX77 278 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 IL22RA2Q969J5 263 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 TOMM40LQ969M1 308 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 NEIL2Q969S2 332 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 FBXL8Q96CD0 374 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 SDSLQ96GA7 329 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 CAPNS2Q96L46 248 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 OR52E6Q96RD3 313 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 ATOH8Q96SQ7 321 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 ZNF184Q99676 751 aaPredicted RBP2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 SIGMAR1Q99720 223 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 NIPSNAP3BQ9BS92 247 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 TAPBPLQ9BX59 468 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 PPDPFQ9H3Y8 114 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 MAP1LC3AQ9H492 121 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 C5orf66Q9H5L9 145 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 ZNF696Q9H7X3 374 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 PTGES2Q9H7Z7 377 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 SLCO1B3Q9NPD5 702 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 HINT3Q9NQE9 182 aaKnown RBP2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 GDF3Q9NR23 364 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 IL36GQ9NZH8 169 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 B3GAT1Q9P2W7 334 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 SS18L2Q9UHA2 77 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 MUTYHQ9UIF7 546 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 SNX12Q9UMY4 172 aa2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 MYH14Q7Z406 1995 aaKnown RBP2.99□□□□□ -1.93
FNDC3B-209ENST00000478016 AFDNP55196 1824 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 LAMB4A4D0S4 1761 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 SIPA1L3O60292 1781 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 ZNFX1Q9P2E3 1918 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 TRAV18A0A075B6X5 111 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 TRAV30A0A087WSZ9 112 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 TRAV39A0A0B4J263 110 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 ZNF816-ZNF321PA0A0X1KG74 233 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 EXOC1LA0A1B0GW35 172 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 A0A1B0GX51 115 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 A0A1W2PRE2 83 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 CXorf65A6NEN9 183 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 OR5H1A6NKK0 313 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 C2CD4DB7Z1M9 353 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 SOCS2O14508 198 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 CCL25O15444 150 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 MBTPS2O43462 519 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 CRLF1O75462 422 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 ATG12O94817 140 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 DIRAS1O95057 198 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 C1orf105O95561 183 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 GLUD1P00367 558 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 CD48P09326 243 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 OR5H8P0DN80 308 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 OR13C7P0DN81 318 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 SLC2A2P11168 524 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 IGFBP3P17936 291 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 PSMB1P20618 241 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 USF1P22415 310 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 LMO1P25800 156 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 APLNRP35414 380 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 APOBEC1P41238 236 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 NKX2-1P43699 371 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 PGGT1BP53609 377 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 CTSCP53634 463 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 TMPRSS3P57727 454 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 PFN3P60673 137 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 RAB8AP61006 207 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 RAB5BP61020 215 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 SNRPEP62304 92 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 PITX1P78337 314 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 DCDP81605 110 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 MRPS6P82932 125 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 RHOGP84095 191 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 PSG4Q00888 419 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 RUNX3Q13761 415 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 LY6DQ14210 128 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 ZNF235Q14590 738 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 ATXN7L3Q14CW9 347 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 TRMT5Q32P41 509 aaKnown RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 ZFP69Q49AA0 526 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 MIDNQ504T8 468 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 SYT14P1Q58G82 188 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 TMEM69Q5SWH9 247 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 AKR1C8PQ5T2L2 129 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 C1orf194Q5T5A4 169 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 AVPI1Q5T686 147 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 OTUD1Q5VV17 481 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 OTPQ5XKR4 325 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 KDM4DQ6B0I6 523 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 DMKNQ6E0U4 476 aaPredicted RBP2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 LAMTOR1Q6IAA8 161 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 GLYATQ6IB77 296 aa2.98□□□□□ -1.93
FNDC3B-209ENST00000478016 CDC42EP5Q6NZY7 148 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms