RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 A0A087WUU8 490 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 MEX3AA1L020 520 aaKnown RBP5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 LINC01548A6NM66 108 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 ANXA2P2A6NMY6 339 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF850A8MQ14 1090 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 SLC1A7O00341 560 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 SLC22A2O15244 555 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 NDUFB2O95178 105 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 CST4P01036 141 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 IGHG2P01859 326 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 TK1P04183 234 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 MED14OSP0DP75 135 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 KITP10721 976 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 PIPP12273 146 aaPredicted RBP5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 RPS27P42677 84 aaKnown RBP5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 GPR4P46093 362 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 MTPNP58546 118 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 PNLIPRP3Q17RR3 467 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 ASPHD1Q5U4P2 390 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 DPY19L2P2Q6ZN68 376 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 ACP7Q6ZNF0 438 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 TCF23Q7RTU1 214 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 PRSS45Q7RTY3 260 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 EIF1ADQ8N9N8 165 aaKnown RBP5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 CSNK2A3Q8NEV1 391 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 OR11H1Q8NG94 326 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 REEP6Q96HR9 211 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 PRRC1Q96M27 445 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 NMNAT3Q96T66 252 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 KCNJ15Q99712 375 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 NABP2Q9BQ15 211 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 OR51I2Q9H344 312 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 RASL12Q9NYN1 266 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 PLA2G2EQ9NZK7 142 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 CCDC167Q9P0B6 97 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF319Q9P2F9 582 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 MOB4Q9Y3A3 225 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 HSPE1-MOB4S4R3N1 261 aa5.69□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A18PA6NE21 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A16PA6NEW6 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A20PA6NIJ5 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A9PA6NNJ1 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A12PA8MX19 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A5PA8MXJ8 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 K7N7A8 449 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FFAR1O14842 300 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 SNNO75324 88 aaPredicted RBP5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A15PP0C7V4 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A13PP0C7W8 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A14PP0C7W9 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM90A24PP0C7X0 464 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 TROVE2P10155 538 aaKnown RBP eCLIP5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 PSKH1P11801 424 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ACKR3P25106 362 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 SLC7A2P52569 658 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 BDH1Q02338 343 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 PRDX4Q13162 271 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 FOXE3Q13461 319 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 SRSF7Q16629 238 aaKnown RBP eCLIP5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 VMACQ2NL98 169 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 CXorf66Q5JRM2 361 aaPredicted RBP5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 SMARCD3Q6STE5 483 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ZBTB49Q6ZSB9 765 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 KCTD8Q6ZWB6 473 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 MBOAT2Q6ZWT7 520 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 CBLL1Q75N03 491 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 LYPD6Q86Y78 171 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ZDHHC21Q8IVQ6 265 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 OFCC1Q8IZS5 231 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 C5orf56Q8N8D9 126 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ANKRD42Q8N9B4 389 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 OR10A6Q8NH74 314 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF671Q8TAW3 534 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 C4orf3Q8WVX3 66 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 AQP3Q92482 292 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ST6GALNAC6Q969X2 333 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF714Q96N38 554 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 OR8B4Q96RC9 309 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 CGREF1Q99674 301 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 COPS4Q9BT78 406 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 CLEC7AQ9BXN2 247 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 TMEM133Q9H2Q1 129 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ABCB9Q9NP78 766 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 ISYNA1Q9NPH2 558 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 PAPOLBQ9NRJ5 636 aaKnown RBP5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 THAP1Q9NVV9 213 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 KIAA1456Q9P272 454 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 RHCGQ9UBD6 479 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 KCNG2Q9UJ96 466 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 SNX13Q9Y5W8 968 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 SESN1Q9Y6P5 492 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 HERC1Q15751 4861 aa5.68□□□□□ -1.5
SPTLC1-205ENST00000477888 MAGEA13PA6NCF6 341 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 OR6C68A6NDL8 312 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 LEUTXA8MZ59 168 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 LY6LH3BQJ8 138 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 J3KTA2 159 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 SAP30O75446 220 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 MMP23AO75900 390 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 IGLV1-47P01700 117 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms