RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 SCG5P05408 212 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 WNT5AP41221 380 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 MMP16P51512 607 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 GBX2P52951 348 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 OR12D2P58182 307 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ROM1Q03395 351 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 SCRN3Q0VDG4 424 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 MRPL28Q13084 256 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ENDOGQ14249 297 aaKnown RBP7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 FAM27BQ5VT28 67 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 METTL11BQ5VVY1 283 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 WDR25Q64LD2 544 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 CORO6Q6QEF8 472 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 UNQ6126/PRO20091Q6UXV3 157 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 CFAP77Q6ZQR2 320 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 KRT77Q7Z794 578 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 PIP4P2Q8N4L2 257 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 YIPF7Q8N8F6 280 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 SPERTQ8NA61 448 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF485Q8NCK3 441 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 WFDC9Q8NEX5 89 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF420Q8TAQ5 688 aaPredicted RBP7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ABHD4Q8TB40 342 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 SLAMF6Q96DU3 332 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 WDFY2Q96P53 400 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 AMELYQ99218 206 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 MROQ9BYG7 248 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 FAM192AQ9GZU8 254 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 KCNN2Q9H2S1 579 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 GCM1Q9NP62 436 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ISYNA1Q9NPH2 558 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 BABAM2Q9NXR7 383 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 NDUFA13Q9P0J0 144 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNRD1Q9P1U0 126 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 LHFPL6Q9Y693 200 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 C5orf49A4QMS7 147 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 PSMD9O00233 223 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 CCRL2O00421 344 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 MAGEB4O15481 346 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF254O75437 659 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 ABHD16AO95870 558 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 CST2P09228 141 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 FBP1P09467 338 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 H2BFMP0C1H6 154 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 CD28P10747 220 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 STOMP27105 288 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 KIR2DS4P43632 304 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 RGS6P49758 472 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 RIDAP52758 137 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 PCBD1P61457 104 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 ACSM1Q08AH1 577 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 CDK5R1Q15078 307 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF829Q3KNS6 432 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF404Q494X3 552 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 LIPKQ5VXJ0 399 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 LYPD2Q6UXB3 125 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 RFPL4BQ6ZWI9 263 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 RNF144BQ7Z419 303 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 KCTD20Q7Z5Y7 419 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 DPPA2Q7Z7J5 298 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 CLVS1Q8IUQ0 354 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 EGFL6Q8IUX8 553 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF679Q8IYX0 411 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 LRRC18Q8N456 261 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 ZFP41Q8N8Y5 198 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 GJC3Q8NFK1 279 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 OR2T6Q8NHC8 308 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 PPP1R35Q8TAP8 253 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 RNF133Q8WVZ7 376 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 YIPF6Q96EC8 236 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 PELI1Q96FA3 418 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 MAP6Q96JE9 813 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 TECTBQ96PL2 329 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 OR2V2Q96R30 315 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 WACQ9BTA9 647 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 HDHD2Q9H0R4 259 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 RBM38Q9H0Z9 239 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 CENPMQ9NSP4 180 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 NDUFB11Q9NX14 153 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 IL19Q9UHD0 177 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 MRM2Q9UI43 246 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 LRP12Q9Y561 859 aa7.97□□□□□ -1.13
SMARCB1-206ENST00000477836 FRAS1Q86XX4 4008 aa7.96□□□□□ -1.13
SMARCB1-206ENST00000477836 STAB2Q8WWQ8 2551 aa7.96□□□□□ -1.13
SMARCB1-206ENST00000477836 PNMA8CA0A1B0GUJ8 204 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 A6NHS1 94 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 DOK2O60496 412 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 RPP14O95059 124 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 GABARAPO95166 117 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 LALBAP00709 142 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 LIPFP07098 398 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 CD36P16671 472 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 CPEP16870 476 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 HSD11B1P28845 292 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 HOXD3P31249 432 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 OPRL1P41146 370 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 TGM4P49221 684 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 PSMA6P60900 246 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 PPP1CBP62140 327 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 GRB2P62993 217 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms