RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 SRRM5B3KS81 715 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 FSTL3O95633 263 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 IGHV2-70P01814 119 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 ACAA1P09110 424 aaPredicted RBP16.75■□□□□ 0.27
ACTB-210ENST00000477812 OCMP0CE72 109 aaPredicted RBP16.75■□□□□ 0.27
ACTB-210ENST00000477812 CALRP27797 417 aaKnown RBP16.75■□□□□ 0.27
ACTB-210ENST00000477812 FAM201AQ5SY85 155 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 NKAIN3Q8N8D7 197 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 RFT1Q96AA3 541 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 GFI1Q99684 422 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 NKX3-1Q99801 234 aaPredicted RBP16.75■□□□□ 0.27
ACTB-210ENST00000477812 NRIP2Q9BQI9 281 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 CHCHD6Q9BRQ6 235 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 FUNDC2Q9BWH2 189 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 TCF7L1Q9HCS4 588 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 SNTG1Q9NSN8 517 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 WIPI2Q9Y4P8 454 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 CREBBPQ92793 2442 aa16.75■□□□□ 0.27
ACTB-210ENST00000477812 TRAV1-2A0A0B4J238 106 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 IGKV1-12A0A0C4DH73 117 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 C3orf80F5H4A9 247 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 NOS1APO75052 506 aaPredicted RBP16.74■□□□□ 0.27
ACTB-210ENST00000477812 IGKV1D-12P01611 117 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 MAS1P04201 325 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 PGA5P0DJD9 388 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 NR4A2P43354 598 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 ERVK11-1P61568 191 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 PDZK1IP1Q13113 114 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 ZMYND11Q15326 602 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 SLC25A26Q70HW3 274 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 CDH26Q8IXH8 852 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 C1orf87Q8N0U7 546 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 POC1AQ8NBT0 407 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 PIMREGQ9BSJ6 248 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 CENPOQ9BU64 300 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 MTCH1Q9NZJ7 389 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 SCOCQ9UIL1 159 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 SSR3Q9UNL2 185 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 POLDIP2Q9Y2S7 368 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 NPTNQ9Y639 398 aa16.74■□□□□ 0.27
ACTB-210ENST00000477812 MEGF11A6BM72 1044 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 MAGEB3O15480 346 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 PPIHO43447 177 aaKnown RBP16.73■□□□□ 0.27
ACTB-210ENST00000477812 PLATP00750 562 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 IRF2P14316 349 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 ZNF93P35789 620 aaPredicted RBP16.73■□□□□ 0.27
ACTB-210ENST00000477812 GPR6P46095 362 aaPredicted RBP16.73■□□□□ 0.27
ACTB-210ENST00000477812 RPL5P46777 297 aaKnown RBP16.73■□□□□ 0.27
ACTB-210ENST00000477812 POU3F4P49335 361 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 BTG1P62324 171 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 SLC16A12Q6ZSM3 486 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 OR5D18Q8NGL1 313 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 ZNF671Q8TAW3 534 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 CPNE2Q96FN4 548 aaPredicted RBP16.73■□□□□ 0.27
ACTB-210ENST00000477812 Q96MF0 132 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 ZNF488Q96MN9 340 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 WDR13Q9H1Z4 485 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 HES4Q9HCC6 221 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 EXOSC4Q9NPD3 245 aaKnown RBP16.73■□□□□ 0.27
ACTB-210ENST00000477812 ITGB1BP2Q9UKP3 347 aa16.73■□□□□ 0.27
ACTB-210ENST00000477812 LOC100506127A0A0U1RQW1 187 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 F8VVB4 439 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 F8VWA3 439 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 WNT9BO14905 357 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 AKR7A2O43488 359 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 SPRY1O43609 319 aaPredicted RBP16.72■□□□□ 0.27
ACTB-210ENST00000477812 ZNF205O95201 554 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 SLC25A16P16260 332 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 CD80P33681 288 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 OR3A4PP47883 348 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 TIMM50Q3ZCQ8 353 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 AVPI1Q5T686 147 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 TEX36Q5VZQ5 186 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 ASCL4Q6XD76 172 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 GDPGP1Q6ZNW5 385 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 C1QL2Q7Z5L3 287 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 SAXO1Q8IYX7 474 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 ZSCAN4Q8NAM6 433 aaPredicted RBP16.72■□□□□ 0.27
ACTB-210ENST00000477812 C19orf18Q8NEA5 215 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 SLAMF9Q96A28 289 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 SEH1LQ96EE3 360 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 RNF167Q9H6Y7 350 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 MAST4O15021 2626 aa16.72■□□□□ 0.27
ACTB-210ENST00000477812 LGALS8O00214 317 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 ANGPTL7O43827 346 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 AIREO43918 545 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 GPR141Q7Z602 305 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 SATL1Q86VE3 508 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 NR2C2APQ86WQ0 139 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 LRRC28Q86X40 367 aaPredicted RBP16.71■□□□□ 0.27
ACTB-210ENST00000477812 PXT1Q8NFP0 134 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 RAB1CQ92928 201 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 TIMD4Q96H15 378 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 CEP19Q96LK0 163 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 UQCC2Q9BRT2 126 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 SLITRK2Q9H156 845 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 CNTD2Q9H8S5 307 aa16.71■□□□□ 0.27
ACTB-210ENST00000477812 PPIAL4EA0A075B759 164 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 IGHV4-61A0A0C4DH41 118 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 OOEPA6NGQ2 149 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms