RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SEC23BQ15437 767 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OR8G1Q15617 311 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OR8B8Q15620 311 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 LY6EQ16553 131 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 NSUN5P1Q3KNT7 163 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 LRRC23Q53EV4 343 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 KLHL12Q53G59 568 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 WDR38Q5JTN6 314 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 VAX1Q5SQQ9 334 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 GLYATL3Q5SZD4 288 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 LDLRAD2Q5SZI1 272 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 TEX36Q5VZQ5 186 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 MBOAT2Q6ZWT7 520 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 DYNAPQ8N1N2 210 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 GJC3Q8NFK1 279 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OR5T2Q8NGG2 359 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OR5L1Q8NGL2 311 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 OR11L1Q8NGX0 322 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 C8orf46Q8TAG6 207 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 RASSF5Q8WWW0 418 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ACOT11Q8WXI4 607 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ST8SIA4Q92187 359 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 TPD52L3Q96J77 140 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 MAGEB18Q96M61 343 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 GPX7Q96SL4 187 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 DDOQ99489 341 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 FUZQ9BT04 418 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ADAT1Q9BUB4 502 aaKnown RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 HDHD2Q9H0R4 259 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 WDR13Q9H1Z4 485 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 DPAGT1Q9H3H5 408 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 FN3KQ9H479 309 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF702PQ9H963 129 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 FN3KRPQ9HA64 309 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 NECAP2Q9NVZ3 263 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 C1orf123Q9NWV4 160 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 CMTM6Q9NX76 183 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 GAR1Q9NY12 217 aaKnown RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 ONECUT1Q9UBC0 465 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 NKX1-2Q9UD57 310 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 CYB5R1Q9UHQ9 305 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 PRPF19Q9UMS4 504 aaKnown RBP3.69□□□□□ -1.82
CKS1B-207ENST00000477676 IER3IP1Q9Y5U9 82 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 KMT2AQ03164 3969 aa3.69□□□□□ -1.82
CKS1B-207ENST00000477676 TRAV38-1A0A0B4J264 116 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 TRBV4-1A0A0J9YWV2 114 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 A0A1B0GVI7 797 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 MEIOCA2RUB1 952 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 HTR3EA5X5Y0 456 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 TRIM64CA6NLI5 447 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 XKRYO14609 159 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 NDUFA2O43678 99 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 ECDO95905 644 aaPredicted RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 SLC2A1P11166 492 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 IGLL1P15814 213 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 HIST1H1CP16403 213 aaKnown RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 TRAM2Q15035 370 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 DGUOKQ16854 277 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 RFX4Q33E94 735 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 ANKDD1AQ495B1 522 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 TCTEX1D4Q5JR98 221 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 STUMQ69YW2 141 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 DGAT2L7PQ6IED9 249 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 WDR82Q6UXN9 313 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF730Q6ZMV8 503 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 Q6ZTK2 550 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 PGAP1Q75T13 922 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 RNF113BQ8IZP6 322 aaKnown RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 C11orf42Q8N5U0 333 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 OR8J3Q8NGG0 315 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 OR56B2PQ8NGI1 322 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 OR4K13Q8NH42 304 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 NPRL2Q8WTW4 380 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 LRRC29Q8WV35 223 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 SPRYD4Q8WW59 207 aaPredicted RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 RSRC1Q96IZ7 334 aaKnown RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 GAFA1Q96PS6 74 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 HIST1H2AAQ96QV6 131 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 NMNAT3Q96T66 252 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 PITX2Q99697 317 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 SSX3Q99909 188 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 ATF6BQ99941 703 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 CITED2Q99967 270 aaPredicted RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 DCTN5Q9BTE1 182 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 HCAR1Q9BXC0 346 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 ELL3Q9HB65 397 aaPredicted RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 LIN7CQ9NUP9 197 aaKnown RBP3.68□□□□□ -1.82
CKS1B-207ENST00000477676 NKIRAS1Q9NYS0 192 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF319Q9P2F9 582 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 AASSQ9UDR5 926 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 FAM96BQ9Y3D0 163 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 MAB21L2Q9Y586 359 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 CAPN7Q9Y6W3 813 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 TNCP24821 2201 aa3.68□□□□□ -1.82
CKS1B-207ENST00000477676 VPS13DQ5THJ4 4388 aa3.67□□□□□ -1.82
CKS1B-207ENST00000477676 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
CKS1B-207ENST00000477676 RYR1P21817 5038 aa3.67□□□□□ -1.82
CKS1B-207ENST00000477676 IGLV5-39A0A0G2JS06 123 aa3.67□□□□□ -1.82
CKS1B-207ENST00000477676 hCG_1807616A0A1W2PRN6 198 aa3.67□□□□□ -1.82
CKS1B-207ENST00000477676 ANKRD61A6NGH8 418 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms