RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PPIL3Q9H2H8 161 aaKnown RBP12.91□□□□□ -0.34
SEC13-215ENST00000477547 CR1P17927 2039 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 CYB5R3P00387 301 aaPredicted RBP12.9□□□□□ -0.34
SEC13-215ENST00000477547 PMELP40967 661 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 CLEC12BQ2HXU8 276 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 ZNF181Q2M3W8 571 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 GPR141Q7Z602 305 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 SATL1Q86VE3 508 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 ANGPTL5Q86XS5 388 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 CALHM1Q8IU99 346 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 KRTAP1-3Q8IUG1 177 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 OR52N4Q8NGI2 321 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 AQP3Q92482 292 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 TMIGD2Q96BF3 282 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 GPER1Q99527 375 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 NKX3-1Q99801 234 aaPredicted RBP12.9□□□□□ -0.34
SEC13-215ENST00000477547 PKIBQ9C010 78 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 FAM192AQ9GZU8 254 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 TXNL4BQ9NX01 149 aaKnown RBP12.9□□□□□ -0.34
SEC13-215ENST00000477547 RNF7Q9UBF6 113 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 POLDIP2Q9Y2S7 368 aa12.9□□□□□ -0.34
SEC13-215ENST00000477547 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 PPIHO43447 177 aaKnown RBP12.89□□□□□ -0.35
SEC13-215ENST00000477547 SYNGR1O43759 233 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 RHBDL1O75783 438 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 EGR1P18146 543 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 MPZP25189 248 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 FGF9P31371 208 aaPredicted RBP12.89□□□□□ -0.35
SEC13-215ENST00000477547 CD80P33681 288 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 KISS1Q15726 138 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 SHEQ5VZ18 495 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 SLC25A26Q70HW3 274 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 RNF144BQ7Z419 303 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 LRRTM1Q86UE6 522 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 C11orf53Q8IXP5 236 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 JAGN1Q8N5M9 183 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 BOLLQ8N9W6 283 aaKnown RBP12.89□□□□□ -0.35
SEC13-215ENST00000477547 PNLDC1Q8NA58 520 aaKnown RBP12.89□□□□□ -0.35
SEC13-215ENST00000477547 TIMD4Q96H15 378 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 FUNDC2Q9BWH2 189 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
SEC13-215ENST00000477547 SNTG1Q9NSN8 517 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 GSTK1Q9Y2Q3 226 aa12.89□□□□□ -0.35
SEC13-215ENST00000477547 KIAA1324LA8MWY0 1029 aaPredicted RBP12.88□□□□□ -0.35
SEC13-215ENST00000477547 TMEM178BH3BS89 294 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 NDUFS8O00217 210 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 AIREO43918 545 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 CYB5AP00167 134 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 ALDOBP05062 364 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 FOSL1P15407 271 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 ADRA2CP18825 462 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 SRMP19623 302 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 GIFP27352 417 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 ZNF93P35789 620 aaPredicted RBP12.88□□□□□ -0.35
SEC13-215ENST00000477547 GPR6P46095 362 aaPredicted RBP12.88□□□□□ -0.35
SEC13-215ENST00000477547 RPL5P46777 297 aaKnown RBP12.88□□□□□ -0.35
SEC13-215ENST00000477547 DSCR9P59020 149 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 HOXA4Q00056 320 aaPredicted RBP12.88□□□□□ -0.35
SEC13-215ENST00000477547 IL24Q13007 206 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 AVPI1Q5T686 147 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 DNM1P46Q6ZS02 220 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 PEG10Q86TG7 708 aaKnown RBP12.88□□□□□ -0.35
SEC13-215ENST00000477547 PRIMA1Q86XR5 153 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 GCSAMQ8N6F7 178 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 OR10Z1Q8NGY1 313 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 C10orf105Q8TEF2 133 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 SLAMF9Q96A28 289 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 CENPOQ9BU64 300 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 BPESC1Q9GZL8 116 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 IGHV4-30-2A0A087WSY4 118 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 ISPDA4D126 451 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 MEGF11A6BM72 1044 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 AKR7A2O43488 359 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 SPRY1O43609 319 aaPredicted RBP12.88□□□□□ -0.35
SEC13-215ENST00000477547 OR3A4PP47883 348 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 ZP1P60852 638 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 GMFBP60983 142 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 BTG1P62324 171 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 RIN1Q13671 783 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 FAM201AQ5SY85 155 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 PRSS57Q6UWY2 283 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 BATF2Q8N1L9 274 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 POC1AQ8NBT0 407 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 C19orf18Q8NEA5 215 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 ZNF671Q8TAW3 534 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 Q96MF0 132 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 KCTD7Q96MP8 289 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 RNF167Q9H6Y7 350 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 WIPI2Q9Y4P8 454 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
SEC13-215ENST00000477547 TRAV1-2A0A0B4J238 106 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 PDCD5O14737 125 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 ANGPTL7O43827 346 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 ZNF205O95201 554 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 PGA5P0DJD9 388 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms