RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TNRC6CQ9HCJ0 1690 aaKnown RBP16.61■□□□□ 0.25
VARS2-209ENST00000477288 MS4A18H0YCH9 400 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 BCL2L11O43521 198 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 MMP7P09237 267 aaPredicted RBP16.61■□□□□ 0.25
VARS2-209ENST00000477288 SMIM18P0DKX4 95 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 FZD5Q13467 585 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 MS4A18Q3C1V0 323 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 ZNF429Q86V71 674 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 VAMP8Q9BV40 100 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 SERGEFQ9UGK8 458 aa16.61■□□□□ 0.25
VARS2-209ENST00000477288 TMIGD3P0DMS9 266 aaPredicted RBP16.6■□□□□ 0.25
VARS2-209ENST00000477288 FAM27D1Q5T7N8 215 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 RAB1BQ9H0U4 201 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 SERPINE3A8MV23 424 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 Q3ZCU0 254 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 TMEM229BQ8NBD8 167 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 GRAMD2BQ96HH9 432 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 C20orf141Q9NUB4 165 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 HTN1P15515 57 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 LPAR6P43657 344 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 PJVKQ0ZLH3 352 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 SLC25A22Q9H936 323 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 MSL2Q9HCI7 577 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 SNRPGP15A8MWD9 76 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 HRASP01112 189 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 MRGPREQ86SM8 312 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 CALHM3Q86XJ0 350 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 OR4A4PQ8NGN8 299 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 OR13G1Q8NGZ3 307 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 PP6455Q8WZ26 134 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 UBTD1Q9HAC8 227 aa16.6■□□□□ 0.25
VARS2-209ENST00000477288 YBX2Q9Y2T7 364 aaKnown RBP16.6■□□□□ 0.25
VARS2-209ENST00000477288 AVPR2P30518 371 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 PTOV1Q86YD1 416 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 LRRC29Q8WV35 223 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 TM4SF19Q96DZ7 209 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 UQCC2Q9BRT2 126 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 MTCH2Q9Y6C9 303 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 ADAM20O43506 726 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 CCL2P13500 99 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 FMODQ06828 376 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 DHRS11Q6UWP2 260 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 OR2M3Q8NG83 312 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 OR4C5Q8NGB2 326 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 LILRB1Q8NHL6 650 aaPredicted RBP16.59■□□□□ 0.25
VARS2-209ENST00000477288 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 KLF3P57682 345 aaPredicted RBP16.59■□□□□ 0.25
VARS2-209ENST00000477288 B4GALNT1Q00973 533 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 SCN9AQ15858 1988 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 PECRQ9BY49 303 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 RHOFQ9HBH0 211 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 ERRFI1Q9UJM3 462 aaPredicted RBP16.59■□□□□ 0.25
VARS2-209ENST00000477288 C3orf80F5H4A9 247 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 SRSF5Q13243 272 aaKnown RBP16.59■□□□□ 0.25
VARS2-209ENST00000477288 LINC00303Q3SY05 128 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 ZNF774Q6NX45 483 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 OR10D3Q8NH80 312 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 UQCC1Q9NVA1 299 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 FOXJ3Q9UPW0 622 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 SFTA3P0C7M3 94 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 EPXP11678 715 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 ETFDHQ16134 617 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 TNFRSF12AQ9NP84 129 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 NAT8BQ9UHF3 227 aa16.59■□□□□ 0.25
VARS2-209ENST00000477288 J3KRW8 73 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 LYZP61626 148 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 PRSS3P2Q8NHM4 247 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 OTOSQ8NHW6 89 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 OR1A1Q9P1Q5 309 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 UFC1Q9Y3C8 167 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 IGHV1OR21-1A0A087WYE8 117 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 ETFRF1Q6IPR1 90 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 TOMM20LQ6UXN7 152 aa16.58■□□□□ 0.25
VARS2-209ENST00000477288 CDX4O14627 284 aaPredicted RBP16.58■□□□□ 0.24
VARS2-209ENST00000477288 ALX3O95076 343 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 PRRX1P54821 245 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 SLC37A1P57057 533 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 TFF2Q03403 129 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 MBTPS2O43462 519 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 FUT7Q11130 342 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 AMMECR1Q9Y4X0 333 aaPredicted RBP16.58■□□□□ 0.24
VARS2-209ENST00000477288 ANKRD34CP0C6C1 535 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 NQO2P16083 231 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 SOX8P57073 446 aa16.58■□□□□ 0.24
VARS2-209ENST00000477288 ARRDC5A6NEK1 342 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 HTR1DP28221 377 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 PABPC1L2AQ5JQF8 200 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 ZFP64Q9NPA5 681 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 ARID1BQ8NFD5 2236 aaPredicted RBP16.57■□□□□ 0.24
VARS2-209ENST00000477288 PYCARD-AS1I3L0S3 204 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 GALR1P47211 349 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 TMEM128Q5BJH2 165 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 DGAT2L7PQ6IED9 249 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 ZNF561Q8N587 486 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 TMEM37Q8WXS4 190 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 IL36GQ9NZH8 169 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 TCRBV5S2A0A599 114 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 KIAA1324LA8MWY0 1029 aaPredicted RBP16.57■□□□□ 0.24
VARS2-209ENST00000477288 CD3EP07766 207 aa16.57■□□□□ 0.24
VARS2-209ENST00000477288 FGF2P09038 288 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms